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The map label for this gene is yghS

Identifier: 30064340

GI number: 30064340

Start: 3117224

End: 3117937

Strand: Reverse

Name: yghS

Synonym: S3233

Alternate gene names: 30064340

Gene position: 3117937-3117224 (Counterclockwise)

Preceding gene: 30064342

Following gene: 30064339

Centisome position: 67.79

GC content: 49.58

Gene sequence:

>714_bases
GTGAATCAACGTAATATGTCAATAATTAATTCCACGCCAGTGCGTGTTATTGCCATTGTAGGATGTGATGGTTCAGGTAA
ATCGACCCTCACGGCAAGCCTGGTAAATGAACTGGCAGCAAGAATGCCAACAGAACACATTTATCTCGGGCAATCGTCCG
GGCGAATTGGCGAATGGATTTCACAGCTCCCTGTTATTGGCGCACCTTGTGGGTGTTATCTGCGAAGTAAAGCGGCACAT
GTACACGAAAAGCCCTTAACTCCGCCTGGCAATATTACTGCGCTGGTTATCTATCTGCTTTCCTGCTGGCGGGCGTACAA
GTTTCGCAAAATGTTGTGTAAAAGCCAGCAAGGCTATCTGCTCATCACCGACCGCTACCCGCAGGTTGAAGTGCCGGGTT
TTCGCTTTGATGGCCCGCAATTGGCAAAAACCACGGGCGGTAACGGTTGGATAAAAATGTTAAGGCAGCGCGAGTTGAAG
CTGTACCAATGGATGGCGTCTTATTTACCCGTATTGTTGATTCGTCTTGGCATTGATGAACAAACCGCGTTTGCGCGTAA
ACCTGACCACCAACTGGCAGCGTTACAGGAAAAAATCGCCGTTACGCCGCAACTGACATTCAATGGCGCCAAGATCCTTG
AACTGGATGGTCGGCAACCAGCCGATGAAATTATGCAAGCGTCACTACGCGCAATTCACGCCGCGCTTTCCTGA

Upstream 100 bases:

>100_bases
AGGTCAATGTCACAATTAGCCATTGTCACAATAAGGTTGAACGGATATTCTGAGCACGGACCACGTAATATTCAATACAT
TATTTACTGCCGGGTTTTTC

Downstream 100 bases:

>100_bases
TCACCAAAATGGATAGGGGATGATTTAACGAATGGATGCACTACAAACACAAACTGTTAATAGTACAACCGCGCCGCAGC
CCAACTACATTCCGGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGCYLRSKAAH
VHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGYLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELK
LYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRQPADEIMQASLRAIHAALS

Sequences:

>Translated_237_residues
MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGCYLRSKAAH
VHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGYLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELK
LYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRQPADEIMQASLRAIHAALS
>Mature_237_residues
MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGCYLRSKAAH
VHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGYLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELK
LYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRQPADEIMQASLRAIHAALS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yghR and yghT [H]

Homologues:

Organism=Escherichia coli, GI1789358, Length=237, Percent_Identity=97.4683544303797, Blast_Score=477, Evalue=1e-136,
Organism=Escherichia coli, GI1789357, Length=218, Percent_Identity=43.5779816513761, Blast_Score=180, Evalue=6e-47,
Organism=Escherichia coli, GI1789359, Length=217, Percent_Identity=36.405529953917, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26301; Mature: 26301

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWI
CCCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
SQLPVIGAPCGCYLRSKAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGYL
HHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDE
EEECCCCCCCCCCEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRQPADEIMQASLRAIHAALS
HHHHHCCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWI
CCCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
SQLPVIGAPCGCYLRSKAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGYL
HHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDE
EEECCCCCCCCCCEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRQPADEIMQASLRAIHAALS
HHHHHCCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]