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The map label for this gene is yghR

Identifier: 30064339

GI number: 30064339

Start: 3116434

End: 3117192

Strand: Reverse

Name: yghR

Synonym: S3232

Alternate gene names: 30064339

Gene position: 3117192-3116434 (Counterclockwise)

Preceding gene: 30064340

Following gene: 30064338

Centisome position: 67.77

GC content: 53.23

Gene sequence:

>759_bases
ATGGATGCACTACAAACACAAACTGTTAATAGTACAACCGCGCCGCAGCCCAACTACATTCCGGGGCTGATTGCGGTGGT
CGGGTGTGATGGCACCGGTAAATCCACGCTGACCACCGACCTGGTGAAATCGCTGCAACAACACTGGCAAACCGAGCGCC
GCTATCTGGGGCTGCTCTCCGGCGAAGACGGCGACAAAATCAAACGATTGCCGTTGGTTGGCGTCTGGCTGGAACGGCGA
TTGGCGGCCAAATCCTCGAAAACCCAAAGCATGAAAACCAAATCTCCGGCGCTATGGGCGGCGGTGATTATGTACTGCTT
CTCGCTGCGAAGAATGGCGAATCTACGCAAGGTTCAGCGACTGGCGCAAAGTGGCGTTCTGGTGGTCAGCGATCGCTTCC
CGCAGGCTGAAATTTCGGGCTTTTATTATGACGGACCGGGGATCGGCGTCGAACGTGCGACCGGGAAAATCAGCATGTTT
CTGGCGCAGCGCGAACGGAGTTTATACCAAAAAATGGCGCAATACCGTCCTGAATTAATCATTCGTTTGGGGATTGATAT
TGATACTGCCATCTCCCGCAAGCCTGACCATGAGTATGCCGAGCTGCAGGACAAAATCGGCGTCATGTCGACGATTGGCT
ATAACGGCACAAAAATTCTTGAGATTGATTCCAGAGCGCCCTACAGCGAAGTGCTGGAACAGGTACAGAAGGCGGTTTCT
CTGGTTGCCATCGTTTCTGACCGCCGAAGTTTAACTTAA

Upstream 100 bases:

>100_bases
GATGGTCGGCAACCAGCCGATGAAATTATGCAAGCGTCACTACGCGCAATTCACGCCGCGCTTTCCTGATCACCAAAATG
GATAGGGGATGATTTAACGA

Downstream 100 bases:

>100_bases
GGCTGGCGGGATATTTTTTACTATCAACGATAAGGTCAGGCTGAATTGGCGGGTTTTAACATCAAACATTGGTTTGCAGA
TGGCGCGTTTCGCACCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERR
LAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMF
LAQRERSLYQKMAQYRPELIIRLGIDIDTAISRKPDHEYAELQDKIGVMSTIGYNGTKILEIDSRAPYSEVLEQVQKAVS
LVAIVSDRRSLT

Sequences:

>Translated_252_residues
MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERR
LAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMF
LAQRERSLYQKMAQYRPELIIRLGIDIDTAISRKPDHEYAELQDKIGVMSTIGYNGTKILEIDSRAPYSEVLEQVQKAVS
LVAIVSDRRSLT
>Mature_252_residues
MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERR
LAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMF
LAQRERSLYQKMAQYRPELIIRLGIDIDTAISRKPDHEYAELQDKIGVMSTIGYNGTKILEIDSRAPYSEVLEQVQKAVS
LVAIVSDRRSLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yghS and yghT [H]

Homologues:

Organism=Escherichia coli, GI1789357, Length=252, Percent_Identity=97.6190476190476, Blast_Score=505, Evalue=1e-144,
Organism=Escherichia coli, GI1789358, Length=218, Percent_Identity=44.4954128440367, Blast_Score=183, Evalue=8e-48,
Organism=Escherichia coli, GI1789359, Length=220, Percent_Identity=33.1818181818182, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28084; Mature: 28084

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLS
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQR
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERSLYQKMAQYRPELI
HHHCCEEEEECCCCCHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
IRLGIDIDTAISRKPDHEYAELQDKIGVMSTIGYNGTKILEIDSRAPYSEVLEQVQKAVS
EEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
LVAIVSDRRSLT
HHHHHHHHCCCC
>Mature Secondary Structure
MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLS
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQR
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERSLYQKMAQYRPELI
HHHCCEEEEECCCCCHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
IRLGIDIDTAISRKPDHEYAELQDKIGVMSTIGYNGTKILEIDSRAPYSEVLEQVQKAVS
EEECCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
LVAIVSDRRSLT
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]