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The map label for this gene is flu [H]

Identifier: 30064308

GI number: 30064308

Start: 3079305

End: 3081425

Strand: Direct

Name: flu [H]

Synonym: S3195

Alternate gene names: 30064308

Gene position: 3079305-3081425 (Clockwise)

Preceding gene: 30064307

Following gene: 30064309

Centisome position: 66.95

GC content: 58.51

Gene sequence:

>2121_bases
GTGGAGGGTAAAGCTGATAATGTCGTACTGGAAAATGGCGGACGCCTGGATGTGCTGACCGGACACACAGCCACTAATAC
CCGCGTGGATGATGGCGGAACGCTGGATGTCCGCAACGGTGGCACCGCCACCACCGTATCCATGGGAAATGGCGGTGTAC
TGCTGGCCGATTCCGGTGCCGCTGTCAGTGGTACCCGGAGCGACGGAAAGGCATTCAGTATCGGAGGCGGTCAGGCGGAT
GCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGTGATACGGCCACGGATACCACGGTAAATGGCGGACT
GTTCACCGCCAGGGGCGGCACACTGGCGGGCACCACCACGCTGAATAACGGCGCCATACTTACCCTTTCCGGGAAGACGG
TGAACAACGATACCCTGACCATCCGTGAAGGCGATGCACTCCTGCAGGGAGGCGCTCTCACCGGTAACGGCAGCGTGGAA
AAATCAGGAAGTGGCACACTCACTGTCAGCAACACCACACTCACCCAGAAAGCCGTCAACCTGAATGAAGGCACGCTGAC
GCTGAACGACAGTACCGTCACCACGGATGTCATTGCTCAGCGCGGTACAGCCCTGAAGCTGACCGGCAGCACTGTGCTGA
ACGGTGCCATTGACCCCACGAATGTCACTCTCGCCTCTGGTGCCACCTGGAATATTCCCGATAACGCCACGGTGCAGTCG
GTGGTGGATGACCTCAGCCATGCCGGACAGATTCATTTCACCTCCACCCGCACAGGGAAGTTCGTACCGGCAACCCTGAA
AGTGAAAAACCTGAACGGACAGAATGGCACCATCAGCCTGCGTGTACGCCCGGATATGGCACAGAACAATGCTGACAGAC
TGGTCATTGACGGTGGCAGGGCAACCGGAAAAACCATCCTGAACCTGGTGAACGCCGGCAACAGTGCGTCGGGGCTGGCG
ACCAGCGGTAAGGGTATTCAGGTGGTGGAAGCCATTAACGGTGCCACCACGGAGGAAGGGGCCTTTATCCAGGGGAATAA
GCTGCAGGCCGGTGCCTTTAACTACTCCCTCAACCGGGACAGTGATGAGAGCTGGTATCTGCGCAGTGAAAATGCTTATC
GTGCAGAAGTCCCCCTGTATGCCTCCATGCTGACACAGGCAATGGACTATGACCGGATTCTGGCAGGCTCCCGCAGCCAT
CAGACCGGTGTAAGCGGTGAAAATAACAGCGTCCGTCTCAGCATTCAGGGCGGTCATCTCGGTCACGATAACAACGGCGG
TATTGCCCGTGGAGCCACGCCGGAAAGCAGCGGCAGCTATGGCTTCGTCCGTCTGGAGGGTGACCTGCTCAGAACAGAGG
TTGCCGGTATGTCTGTGACCGCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCC
CGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGATACACAACGCCTCCGGCCTGTGGGC
TGACATTGTGGCCCAGGGAACCCGCCACAGCATGAAAGCCTCATCGGACAATAACGACTTCCGCGTCCGGGGCTGGGGCT
GGCTGGGTTCGCTGGAAACCGGTCTGCCCTTCAGTATCACTGACAATCTGATGCTGGAGCCGCAACTGCAGTACACCTGG
CAGGGACTCTCCCTGGATGACGGCCAGGATAACGCCAGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGTGCGTGC
CGGCTTCCGTCTGGGCAGCCACCACGATATGAACTTTGGTAAAGGCACCTCATCCCGTGACACCCTGCGCGGCAGTGCCA
AACACAGTGTGCGTGAACTGCCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCCCGGGGGGACATG
AGCATGGGTACAGCCGCAGCCGGCAGTAACATGACGTTCTCACCGTCACAGAATGGTACGTCACTGGACCTGCAGGCCGG
ACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCAGTTATGCCCACAGCATCAACGGCAGCAGCGCTG
AAGGTTATAACAGTCAGGCCACACTGAATGTAACCTTCTGA

Upstream 100 bases:

>100_bases
GCGGTAAAGCGTCTGATGTCACCCAGAACACGGCGGTGCACTGGTTACCAGTACAGCTGCAACCGTCACCGGCACAAACC
GCCTGGGAGCATTCTCTGTT

Downstream 100 bases:

>100_bases
TAATTCTGCATTGCCTCTCTGTGGTCCCGGTCATGATGACCGGGACCCGGACGGGGGAAAACGTTTCAGTGCCACATTCA
CTGGCATTCACAATAACATG

Product: outer membrane fluffing protein

Products: NA

Alternate protein names: AG43; Fluffing protein [H]

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQAD
ALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGALTGNGSVE
KSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQS
VVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLA
TSGKGIQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH
QTGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGS
RAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRVRGWGWLGSLETGLPFSITDNLMLEPQLQYTW
QGLSLDDGQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFGKGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM
SMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGVQASYAHSINGSSAEGYNSQATLNVTF

Sequences:

>Translated_706_residues
MEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQAD
ALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGALTGNGSVE
KSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQS
VVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLA
TSGKGIQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH
QTGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGS
RAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRVRGWGWLGSLETGLPFSITDNLMLEPQLQYTW
QGLSLDDGQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFGKGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM
SMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGVQASYAHSINGSSAEGYNSQATLNVTF
>Mature_706_residues
MEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQAD
ALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGALTGNGSVE
KSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQS
VVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLA
TSGKGIQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH
QTGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGS
RAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRVRGWGWLGSLETGLPFSITDNLMLEPQLQYTW
QGLSLDDGQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFGKGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM
SMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGVQASYAHSINGSSAEGYNSQATLNVTF

Specific function: Controls colony form variation and autoaggregation. May function as an adhesin [H]

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Antigen 43 beta chain:Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI48994897, Length=706, Percent_Identity=95.8923512747875, Blast_Score=1355, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 73206; Mature: 73206

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGA
CCCCCCCEEEECCCEEEEEECCCCCCCEECCCCEEEECCCCCEEEEEECCCCEEEECCCC
AVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTT
EEECCCCCCCEEEECCCCEEEEEEECCCCEEEECCCCCCCCEECCCEEEECCCEEEEEEE
LNNGAILTLSGKTVNNDTLTIREGDALLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVN
ECCCEEEEEECCEECCCEEEEECCCEEEECCEEECCCCEECCCCCEEEEECCEEEEEEEE
LNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQS
CCCCEEEECCCCEEHHHHHCCCCEEEEECCEEECCCCCCCCEEEECCEEECCCCCCHHHH
VVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGR
HHHHHHHCCEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCC
ATGKTILNLVNAGNSASGLATSGKGIQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRD
CCCHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCCCCCCCEEECCEEECCEEEEEECCC
SDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVSGENNSVRLSIQGGHL
CCCCEEEECCCCEEEECCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
GHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGS
CCCCCCCEECCCCCCCCCCEEEEEEECCEEEEEECCCEEECCEEECCCCCEEEEECCCCC
RAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRVRGWGWLGSLET
CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCC
GLPFSITDNLMLEPQLQYTWQGLSLDDGQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFG
CCCEEECCCEEECCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHEECCCCCCCCCC
KGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGT
CCCCCCHHHCCCHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCC
SLDLQAGLEARVRENITLGVQASYAHSINGSSAEGYNSQATLNVTF
EEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGA
CCCCCCCEEEECCCEEEEEECCCCCCCEECCCCEEEECCCCCEEEEEECCCCEEEECCCC
AVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTT
EEECCCCCCCEEEECCCCEEEEEEECCCCEEEECCCCCCCCEECCCEEEECCCEEEEEEE
LNNGAILTLSGKTVNNDTLTIREGDALLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVN
ECCCEEEEEECCEECCCEEEEECCCEEEECCEEECCCCEECCCCCEEEEECCEEEEEEEE
LNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQS
CCCCEEEECCCCEEHHHHHCCCCEEEEECCEEECCCCCCCCEEEECCEEECCCCCCHHHH
VVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGR
HHHHHHHCCEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCC
ATGKTILNLVNAGNSASGLATSGKGIQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRD
CCCHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCCCCCCCEEECCEEECCEEEEEECCC
SDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVSGENNSVRLSIQGGHL
CCCCEEEECCCCEEEECCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
GHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGS
CCCCCCCEECCCCCCCCCCEEEEEEECCEEEEEECCCEEECCEEECCCCCEEEEECCCCC
RAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRVRGWGWLGSLET
CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCC
GLPFSITDNLMLEPQLQYTWQGLSLDDGQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFG
CCCEEECCCEEECCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHEECCCCCCCCCC
KGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGT
CCCCCCHHHCCCHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCC
SLDLQAGLEARVRENITLGVQASYAHSINGSSAEGYNSQATLNVTF
EEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2661530; 9298646; 9103983 [H]