Click here to switch to the map view.

The map label for this gene is flu [H]

Identifier: 30064307

GI number: 30064307

Start: 3078306

End: 3079199

Strand: Direct

Name: flu [H]

Synonym: S3194

Alternate gene names: 30064307

Gene position: 3078306-3079199 (Clockwise)

Preceding gene: 30064306

Following gene: 30064308

Centisome position: 66.93

GC content: 56.26

Gene sequence:

>894_bases
ATGAAACGACATCTGAATACCTGCTACAGGCTGGTATGGAATCACATTACGGGCGCTTTCGTGGTTGCCTCCGAACTGGC
CCGCGCACAGGGTAAACGTGGCGGTGTGGCGGTTGCACTGTCTCTTGCCGCGGTCACGTCACTCCCGGTGCTGGCTGCTG
ACATCGTTGTGCACCCGGGTGAAACAGTGAATGGCGGAACACTGGTAAACCATGACAACCAGTTTGTATCCGGAACAGCT
GATGGCGTGACTGTCAGTACCGGGCTTGAGCTGGGGCCGGACAGTGACGAAAACACCGGCGGGCAATGGATAAAAGCGGG
TGGCACAGGCAGAAACACCACTGTCACCGCAAATGGTCGTCAGATTGTGCAGGCAGGAGGAACTGCCAGTGATACGGTTA
TTCGTGATGGCGGAGGGCAGAGCCTTAACGGACTGGCGGTGAACACCACGCTGGATAACAGAGGTGAGCAGTGGGTACAC
GGGGGAGGGAAAGCTGCCGGTACAATTATTAACCAGGATGGTTACCAGACCATAAAACATGGCGGACTGGCAACCGGAAC
CATCGTCAACACCGGTGCAGAAGGTGGTCCGGAGTCTGAAAATGTGTCCAGCGGTCAGATGGTCGGAGGGACGGCTGAAT
CCACCACCATCAATAAAAATGGCCGGCAGGTTATCTGGTCTTCGGGGATGGCACGGGACACCCTCATTTACGCCGGTGGT
GACCAGACGGTACACGGAGAGGCACATAACACCCGACTGGAGGGGGGTAACCAGTATGTACACAACGGTGGCACGGCAAC
AGAGACGCTGATAAACCGTGATGGCTGGCAGGTGATTAAGGAAGGAGGAACTGCCGCGCATACCACCATCAACCAGAAAG
AAAGCTGCAGGTGA

Upstream 100 bases:

>100_bases
GTCAGCCGGACCTCCGGCACTGTAACCCTTTACCTGCCGGTATCCACATCTGTGGATACCGGCTTTTTTATTCACCCTCA
CTCTGATTAAGGAAATGCTG

Downstream 100 bases:

>100_bases
ATGCCGCGGTAAAGCGTCTGATGTCACCCAGAACACGGCGGTGCACTGGTTACCAGTACAGCTGCAACCGTCACCGGCAC
AAACCGCCTGGGAGCATTCT

Product: outer membrane fluffing protein

Products: NA

Alternate protein names: AG43; Fluffing protein [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGVAVALSLAAVTSLPVLAADIVVHPGETVNGGTLVNHDNQFVSGTA
DGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVH
GGGKAAGTIINQDGYQTIKHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGG
DQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKESCR

Sequences:

>Translated_297_residues
MKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGVAVALSLAAVTSLPVLAADIVVHPGETVNGGTLVNHDNQFVSGTA
DGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVH
GGGKAAGTIINQDGYQTIKHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGG
DQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKESCR
>Mature_297_residues
MKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGVAVALSLAAVTSLPVLAADIVVHPGETVNGGTLVNHDNQFVSGTA
DGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVH
GGGKAAGTIINQDGYQTIKHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGG
DQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKESCR

Specific function: Controls colony form variation and autoaggregation. May function as an adhesin [H]

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Antigen 43 beta chain:Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI48994897, Length=293, Percent_Identity=70.3071672354949, Blast_Score=406, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 30533; Mature: 30533

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGVAVALSLAAVTSLPVLAADIVVHPG
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCEEEEEEECCC
ETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGR
CCCCCCEEEECCCCEEECCCCCEEEECCCEECCCCCCCCCCCEEEECCCCCCCEEEECCC
QIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTIKH
EEEECCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEECCCCCEEEEEECCCCHHHHHC
GGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGG
CCCEECEEEECCCCCCCCCCCCCCCCEECCCCCCEEECCCCCEEEEECCCCCCEEEEECC
DQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKESCR
CCEEECCCCCCEECCCCEEEECCCCHHHHHHCCCCHHHHHCCCCEEEEECCCHHCCC
>Mature Secondary Structure
MKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGVAVALSLAAVTSLPVLAADIVVHPG
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCEEEEEEECCC
ETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGR
CCCCCCEEEECCCCEEECCCCCEEEECCCEECCCCCCCCCCCEEEECCCCCCCEEEECCC
QIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTIKH
EEEECCCCCCCCEEECCCCCCCCCEEEEEEECCCCCEEECCCCCEEEEEECCCCHHHHHC
GGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGG
CCCEECEEEECCCCCCCCCCCCCCCCEECCCCCCEEECCCCCEEEEECCCCCCEEEEECC
DQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKESCR
CCEEECCCCCCEECCCCEEEECCCCHHHHHHCCCCHHHHHCCCCEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2661530; 9298646; 9103983 [H]