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The map label for this gene is yiaM [C]

Identifier: 30064274

GI number: 30064274

Start: 3030209

End: 3030712

Strand: Direct

Name: yiaM [C]

Synonym: S3153

Alternate gene names: 30064274

Gene position: 3030209-3030712 (Clockwise)

Preceding gene: 30064273

Following gene: 30064276

Centisome position: 65.88

GC content: 43.25

Gene sequence:

>504_bases
ATGATATTTAACCGCCTGAAACTTGCGGTAGACCGCGTCATTGCCACGTTTTCTGTCGCCGTAATGCTTGCTCTGGTTGT
ATGCGTAGTCTGGCAAGTATTTAGCCGCTACGTACTTAACCAGCCAAGTACATTAACCGATGAGCTGGCACGCTTTTTGA
TGATCTGGGTAGGATTATTAGGTGCTGCATATACCGTCGGCGCGCAGCGACATCTCTCTATTGATTTATTTGCTCTCGCC
CTGAATAAGCGCAAACAATTACTTCTTAGTATAGTCATTAACGTTCTCATTTTAGGTTTTGCCGGTTCGGTCATTGTGAC
TGGTGGCCTGAAATTAATTGATAAAACACTGGCAACATCACAGGTATCTGCCGCTATGCAAATACCGATGGGATACGTAT
ATATCATTCTGCCATTAAGTGGAGTGGTAATGATGTTTTATGCCTTGTGTTTTATTAATCAAAGCATTCAACAACTGAAA
CAACCTGCGCAGGAGGCCAGTTAA

Upstream 100 bases:

>100_bases
AAAAAGATCCAAAACAAGCTGCTTTGTTAGAGAAATTCGACAACGCTGCTCAATAATATTCCGGGCCAGCCTCTGGCCCT
GATTTTCCAGGATGCTTACA

Downstream 100 bases:

>100_bases
TGGATAGGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACC
GATTTTGAGAACGACAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transport System; Aspartate Kinase Monofunctional Class; TRAP Transporter Small Transmembrane Protein; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Inner Membrane Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MIFNRLKLAVDRVIATFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLFALA
LNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGVVMMFYALCFINQSIQQLK
QPAQEAS

Sequences:

>Translated_167_residues
MIFNRLKLAVDRVIATFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLFALA
LNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGVVMMFYALCFINQSIQQLK
QPAQEAS
>Mature_167_residues
MIFNRLKLAVDRVIATFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLFALA
LNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGVVMMFYALCFINQSIQQLK
QPAQEAS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18335; Mature: 18335

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNRLKLAVDRVIATFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GAAYTVGAQRHLSIDLFALALNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QVSAAMQIPMGYVYIILPLSGVVMMFYALCFINQSIQQLKQPAQEAS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFNRLKLAVDRVIATFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GAAYTVGAQRHLSIDLFALALNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QVSAAMQIPMGYVYIILPLSGVVMMFYALCFINQSIQQLKQPAQEAS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA