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The map label for this gene is yiiZ [H]

Identifier: 30064273

GI number: 30064273

Start: 3029571

End: 3030164

Strand: Direct

Name: yiiZ [H]

Synonym: S3152

Alternate gene names: 30064273

Gene position: 3029571-3030164 (Clockwise)

Preceding gene: 30064272

Following gene: 30064274

Centisome position: 65.87

GC content: 42.09

Gene sequence:

>594_bases
ATGGACTCAACAAAAGACAAAGGCTTTTTTGCTTTATCAGCTTATGTAGCGGGTACTCGCAGTTTCTATGCGAAAAAACC
GATTACAAAGCCAGAAGATCTTAAAGGACTGAAAATTCGTGTTCAGCCAAGTCCGACCACCATCAAAATGATTGAACTGA
TGGGTGGTTCACCCACTCCAATTTCATTTGGCGAAGTTTATACTGCGATGCAGCAAGGTGTAGTAGATGGCGCAGAAAAT
AACGTGCCTTCCTGGATGCAGACTCGACATATTGAAATTGCCAAAGTTTTTTCTGAAGATGAACACGCCTCAATTCCTGA
CTTTTTGGTTATCTCCACCAAAACATGGAATAAATTAACCCCAGAACAGCAACAAATCCTCGAAACAGCGGCGAAGAAAT
CCGAAGCTTATCAACAAAAATTGTGGGAAAAAATTGACGCTGACACACGTGCTCAGGCGAAAGCTATGGGGGGTGAAATT
GTAAAAGTGGATAAAGCGCCATTCCGTAAAGCCGTGCAACCTCTGTTTGACGACTTCAAAAAAGATCCAAAACAAGCTGC
TTTGTTAGAGAAATTCGACAACGCTGCTCAATAA

Upstream 100 bases:

>100_bases
AAAGGTTCCGCCAGTGATCTGGAGTCTTTTGATAATATTTATGCTATCTATAATTTGCCGTTCTTATTAAGTTGTTTTTG
GTGAAGTTGGTAAAGAAATT

Downstream 100 bases:

>100_bases
TATTCCGGGCCAGCCTCTGGCCCTGATTTTCCAGGATGCTTACAATGATATTTAACCGCCTGAAACTTGCGGTAGACCGC
GTCATTGCCACGTTTTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MDSTKDKGFFALSAYVAGTRSFYAKKPITKPEDLKGLKIRVQPSPTTIKMIELMGGSPTPISFGEVYTAMQQGVVDGAEN
NVPSWMQTRHIEIAKVFSEDEHASIPDFLVISTKTWNKLTPEQQQILETAAKKSEAYQQKLWEKIDADTRAQAKAMGGEI
VKVDKAPFRKAVQPLFDDFKKDPKQAALLEKFDNAAQ

Sequences:

>Translated_197_residues
MDSTKDKGFFALSAYVAGTRSFYAKKPITKPEDLKGLKIRVQPSPTTIKMIELMGGSPTPISFGEVYTAMQQGVVDGAEN
NVPSWMQTRHIEIAKVFSEDEHASIPDFLVISTKTWNKLTPEQQQILETAAKKSEAYQQKLWEKIDADTRAQAKAMGGEI
VKVDKAPFRKAVQPLFDDFKKDPKQAALLEKFDNAAQ
>Mature_197_residues
MDSTKDKGFFALSAYVAGTRSFYAKKPITKPEDLKGLKIRVQPSPTTIKMIELMGGSPTPISFGEVYTAMQQGVVDGAEN
NVPSWMQTRHIEIAKVFSEDEHASIPDFLVISTKTWNKLTPEQQQILETAAKKSEAYQQKLWEKIDADTRAQAKAMGGEI
VKVDKAPFRKAVQPLFDDFKKDPKQAALLEKFDNAAQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=195, Percent_Identity=32.3076923076923, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 21982; Mature: 21982

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTKDKGFFALSAYVAGTRSFYAKKPITKPEDLKGLKIRVQPSPTTIKMIELMGGSPTP
CCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCC
ISFGEVYTAMQQGVVDGAENNVPSWMQTRHIEIAKVFSEDEHASIPDFLVISTKTWNKLT
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
PEQQQILETAAKKSEAYQQKLWEKIDADTRAQAKAMGGEIVKVDKAPFRKAVQPLFDDFK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
KDPKQAALLEKFDNAAQ
CCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSTKDKGFFALSAYVAGTRSFYAKKPITKPEDLKGLKIRVQPSPTTIKMIELMGGSPTP
CCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCC
ISFGEVYTAMQQGVVDGAENNVPSWMQTRHIEIAKVFSEDEHASIPDFLVISTKTWNKLT
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
PEQQQILETAAKKSEAYQQKLWEKIDADTRAQAKAMGGEIVKVDKAPFRKAVQPLFDDFK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
KDPKQAALLEKFDNAAQ
CCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]