Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is ygfE
Identifier: 30064221
GI number: 30064221
Start: 2981615
End: 2981944
Strand: Direct
Name: ygfE
Synonym: S3095
Alternate gene names: 30064221
Gene position: 2981615-2981944 (Clockwise)
Preceding gene: 30064212
Following gene: 30064222
Centisome position: 64.83
GC content: 46.67
Gene sequence:
>330_bases ATGTCTGCACAACCCGTCGATATCCAAATTTTTGGCCGTTCACTGCGTGTGAACTGCCCGCCTGACCAAAGGGATGCGTT GAATCAGGCAGCGGACGATCTGAACCAACGGTTGCAAGATCTGAAAGAACGCACTAGAGTCACAAATACTGAACAGTTGG TCTTCATTGCCGCATTGAATATCAGCTATGAGTTAGCGCAAGAAAAAGCAAAGACTCGTGACTACGCGGCAAGTATGGAA CAGCGTATTCGGATGCTGCAGCAGACCATAGAACAAGCGTTACTTGAACAAGGTCGCATCACCGAAAAAACTAACCAAAA CTTTGAATGA
Upstream 100 bases:
>100_bases AAGGGCTTGTCTCTTCTCATCAGGGTAGCTATAGTGTCGCCCCTTCGCAGACCATGGGTCTAAAGACGAAGGCAGCGCAG TCAATCAGCAGGAAGGTGGC
Downstream 100 bases:
>100_bases CACTTTTCGGTTTACTGTGGTAGAGTAACCGTGAAGACAAAATTTCTCTGAGATGTTCGCAAGCGGGCCAGTCCCCTGAG CCGATATTTCATACCACAAG
Product: Z-ring-associated protein
Products: NA
Alternate protein names: Z ring-associated protein ZapA [H]
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALNISYELAQEKAKTRDYAASME QRIRMLQQTIEQALLEQGRITEKTNQNFE
Sequences:
>Translated_109_residues MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALNISYELAQEKAKTRDYAASME QRIRMLQQTIEQALLEQGRITEKTNQNFE >Mature_108_residues SAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQ RIRMLQQTIEQALLEQGRITEKTNQNFE
Specific function: Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for c
COG id: COG3027
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm. Note=Localizes at mid-cell (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZapA family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789277, Length=109, Percent_Identity=100, Blast_Score=220, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007838 [H]
Pfam domain/function: PF05164 ZapA [H]
EC number: NA
Molecular weight: Translated: 12594; Mature: 12463
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALN CCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHH ISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKTNQNFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALN CCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHH ISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKTNQNFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA