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The map label for this gene is ygfA

Identifier: 30064222

GI number: 30064222

Start: 2982244

End: 2982792

Strand: Direct

Name: ygfA

Synonym: S3097

Alternate gene names: 30064222

Gene position: 2982244-2982792 (Clockwise)

Preceding gene: 30064221

Following gene: 30064225

Centisome position: 64.84

GC content: 52.09

Gene sequence:

>549_bases
ATGATTCGGCAACGTCGTCGTGCGTTAACGCCGGAACAACAGCTGGAAATGGGTCAACAAGCCGCTACCCGGATGATGAC
TTATCCCCCGGTGGTGATGGCGCATACGGTCGCTGTATTCCTCTCTTTTGATGGTGAACTCGACACCCAGCCCCTAATAG
AACAACTCTGGCGCGCCGGTAAGCGCGTATATCTTCCAGTTTTGCATCCCTTTAGTGCCGGTAATTTGCTGTTCCTGAAT
TACCATCCGCAAAGCGAACTGGTGATGAACAGGTTGAAGATCCATGAGCCAAAACTGGATGTGCGTGACGTGCTACCCCT
TTCCCGATTAGACGTGCTGATCACACCGCTGGTCGCCTTTGATGAGTACGGTCAGCGCCTGGGAATGGGCGGTGGTTTTT
ATGATCGGACCTTACAAAACTGGCAGCACTATAAAACGCAACCGGTGGGTTATGCGCATGATTGTCAGTTGGTGGAAAAA
CTCCCCGTTGAAGAGTGGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAA

Upstream 100 bases:

>100_bases
GCCTGCGGCGGCATCTCGGAGATTCCCTTCTTATCTGGCACCAGCCATGACGCAACTACCAGAGCTCCCACTGACATTAT
CCCGACAAGAAATCCGCAAA

Downstream 100 bases:

>100_bases
GGGCGATACACCTGCATCGCCCTGATTGACATCGTTGATTCTTTAACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGC
TCCTCCCCTGTGACTGACTG

Product: putative ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIRQRRRALTPEQQLEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLN
YHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEK
LPVEEWDIPLPAVVTPSKVWEW

Sequences:

>Translated_182_residues
MIRQRRRALTPEQQLEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLN
YHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEK
LPVEEWDIPLPAVVTPSKVWEW
>Mature_182_residues
MIRQRRRALTPEQQLEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLN
YHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEK
LPVEEWDIPLPAVVTPSKVWEW

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Homo sapiens, GI5453746, Length=181, Percent_Identity=25.9668508287293, Blast_Score=74, Evalue=7e-14,
Organism=Escherichia coli, GI1789278, Length=182, Percent_Identity=99.4505494505495, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21091; Mature: 21091

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQRRRALTPEQQLEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAG
CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCC
KRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAF
CEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHH
DEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVW
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCHHHC
EW
CC
>Mature Secondary Structure
MIRQRRRALTPEQQLEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAG
CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCC
KRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAF
CEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHH
DEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVW
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCHHHC
EW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]