Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30064189
Identifier: 30064189
GI number: 30064189
Start: 2945154
End: 2946143
Strand: Reverse
Name: 30064189
Synonym: S3059
Alternate gene names: NA
Gene position: 2946143-2945154 (Counterclockwise)
Preceding gene: 30064190
Following gene: 30064185
Centisome position: 64.06
GC content: 52.53
Gene sequence:
>990_bases ATGAATATGACTAAAAACGCTTTCCAGTTTGGCATTGAGCCAGTACGCATCACCGATACCGACAACATTCAGGTCAATGA AGGTCTGCCGACTAACGCCGACCCTCAGGTCTATGCCCTCCAGTTAGCTAAGACTGTTAAGGCTATGCTGAACGGTGTAC TTAAAGACGCTCAAGATAACATCCCGTTCCCTGTAGAAGTCCTGCCGACCCGTAACAGCTTACCGACTCCAATCATTGCT CACACTCTGGCTGACCGCTCTGTGCTGGTCCCTGTCCGTGGTGGTAAGCGACCTGAAGTTGTGACCGCTCCGTCTGGCAC TGAAATCACCGTTGAGCCGATTGAACAGGCGATCCTCGTGTCTCACCAAACAAAGCTTTGGGACCAGAAGTCGACCACTG GTTTCACTCAGGGGACGCTCCAGCAGGACGCACTGAACATCTGCGATAACGTGATTCGTACCATTAACTCTAAGATGGTT GACGTGCTGGAGTCCTCAAAGCTGCTGAAGACCGTAGAACTTCCGGCCCTGACTGGTAGCCTGACCGCTAAGGCTGACGC TATCATGGATGCCCTGTACGAGAACACGGAGTCTTCTTTCGGTTCTGAGGTTTCTGACTACGGCATTATCGCCCATGAGT CACACCTCAAGGCTCTCTCCCGTCTGGCTGCTAAGCAGGGCTTCGGTGGTGAAGACGCTATCGTCGATATGCTGGGGACT GACGTCGCCTATTACAACGGTGAAGACCGTGGCGTGTTCATGATGGCTAAGCGTTTTACGGCTCTGAGCTTCGGTTGCTT CCGTCACGATGGCGAGAGCATTACTGTGGTCCTTTCACGTGATGGAGACTCCCAGTCTCACGACCTTGAGATTCTCGGCA AGGTGTTTGTTGTAGCTGAAGCTGCTACGACCATCAAGATGGGTACTGGCTCGGCTACTGCTGTCCTGCCTGTAGTCAAA CGCCTGAGCTTCACTAAAGAAGCTAACTAA
Upstream 100 bases:
>100_bases GGATGGACAGCTTGTAAGCAAGCGTCCCTCATCTGAGAACACACGGTCCCTGACTGCCTGTTAGGGACTTCAAGTATTTG ACTCAAGGAGATTAATTATA
Downstream 100 bases:
>100_bases CAATAACGACTATTGGTCAGACTTCCGAACTGGATGTCTGGCCTTTATTTTGTACTAGTAATCTAGTTTGTGAATACAGA AAGTAGGAGGGCCAAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNMTKNAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAKTVKAMLNGVLKDAQDNIPFPVEVLPTRNSLPTPIIA HTLADRSVLVPVRGGKRPEVVTAPSGTEITVEPIEQAILVSHQTKLWDQKSTTGFTQGTLQQDALNICDNVIRTINSKMV DVLESSKLLKTVELPALTGSLTAKADAIMDALYENTESSFGSEVSDYGIIAHESHLKALSRLAAKQGFGGEDAIVDMLGT DVAYYNGEDRGVFMMAKRFTALSFGCFRHDGESITVVLSRDGDSQSHDLEILGKVFVVAEAATTIKMGTGSATAVLPVVK RLSFTKEAN
Sequences:
>Translated_329_residues MNMTKNAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAKTVKAMLNGVLKDAQDNIPFPVEVLPTRNSLPTPIIA HTLADRSVLVPVRGGKRPEVVTAPSGTEITVEPIEQAILVSHQTKLWDQKSTTGFTQGTLQQDALNICDNVIRTINSKMV DVLESSKLLKTVELPALTGSLTAKADAIMDALYENTESSFGSEVSDYGIIAHESHLKALSRLAAKQGFGGEDAIVDMLGT DVAYYNGEDRGVFMMAKRFTALSFGCFRHDGESITVVLSRDGDSQSHDLEILGKVFVVAEAATTIKMGTGSATAVLPVVK RLSFTKEAN >Mature_329_residues MNMTKNAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAKTVKAMLNGVLKDAQDNIPFPVEVLPTRNSLPTPIIA HTLADRSVLVPVRGGKRPEVVTAPSGTEITVEPIEQAILVSHQTKLWDQKSTTGFTQGTLQQDALNICDNVIRTINSKMV DVLESSKLLKTVELPALTGSLTAKADAIMDALYENTESSFGSEVSDYGIIAHESHLKALSRLAAKQGFGGEDAIVDMLGT DVAYYNGEDRGVFMMAKRFTALSFGCFRHDGESITVVLSRDGDSQSHDLEILGKVFVVAEAATTIKMGTGSATAVLPVVK RLSFTKEAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35482; Mature: 35482
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMTKNAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAKTVKAMLNGVLKDAQDN CCCCCCHHHHCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC IPFPVEVLPTRNSLPTPIIAHTLADRSVLVPVRGGKRPEVVTAPSGTEITVEPIEQAILV CCCCEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHH SHQTKLWDQKSTTGFTQGTLQQDALNICDNVIRTINSKMVDVLESSKLLKTVELPALTGS HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC LTAKADAIMDALYENTESSFGSEVSDYGIIAHESHLKALSRLAAKQGFGGEDAIVDMLGT HHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCC DVAYYNGEDRGVFMMAKRFTALSFGCFRHDGESITVVLSRDGDSQSHDLEILGKVFVVAE CEEEECCCCCCEEEEEHHHHHHHHHHEEECCCEEEEEEECCCCCCCCHHHHHHHHHHEEE AATTIKMGTGSATAVLPVVKRLSFTKEAN HHHEEEECCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNMTKNAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAKTVKAMLNGVLKDAQDN CCCCCCHHHHCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC IPFPVEVLPTRNSLPTPIIAHTLADRSVLVPVRGGKRPEVVTAPSGTEITVEPIEQAILV CCCCEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHH SHQTKLWDQKSTTGFTQGTLQQDALNICDNVIRTINSKMVDVLESSKLLKTVELPALTGS HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC LTAKADAIMDALYENTESSFGSEVSDYGIIAHESHLKALSRLAAKQGFGGEDAIVDMLGT HHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCC DVAYYNGEDRGVFMMAKRFTALSFGCFRHDGESITVVLSRDGDSQSHDLEILGKVFVVAE CEEEECCCCCCEEEEEHHHHHHHHHHEEECCCEEEEEEECCCCCCCCHHHHHHHHHHEEE AATTIKMGTGSATAVLPVVKRLSFTKEAN HHHEEEECCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA