Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30064190
Identifier: 30064190
GI number: 30064190
Start: 2946227
End: 2946718
Strand: Reverse
Name: 30064190
Synonym: S3060
Alternate gene names: NA
Gene position: 2946718-2946227 (Counterclockwise)
Preceding gene: 30064191
Following gene: 30064189
Centisome position: 64.07
GC content: 53.46
Gene sequence:
>492_bases ATGATGTTCAACAACAACAACTGGAAGCTGTCAGTCACCGACATCAACCTTTATGAAAACACTGTGAGTCTGGACGGTCA GTCCTATCCGTTGTCGCTCGCTATCAAGACCCTCATTCCGGGCTACCTGTCAGGCTTACCGTCCACCAGCCGCGAGGCGA TGGAGTTACTGGAAGCTCTGGCTGAAGCTGGCGTGACCATTGGTAACTTCTTCAGTAATGACCTGATGACCGCCTACCAA CGCCGCCAGATGAACAAACGAGCTGAAGCTGAGCGTATCGCTAAAGAGCTAGCGTCTCAGAAAGAGCGTACCCGCGAAAT GTTCATGACCGAAGACGAATGGCAAAAAGAGCTACAGCGCCGCGAACAGGTCAAAGCTGAACGCCGGACCTATGGTGAAA ACCTCCGCAGCGCTACTCATTCCGCTGGTCGCTCACGTGCCGCTATCGTCGCTGACCTTGAGTCAGGCGGTAACTGGATG GACAGCTTGTAA
Upstream 100 bases:
>100_bases CTAATTTAAACACCTTTTGAGATGACCGATGCGGGGAGACCCGTAGGCCTTACTGTGCCTGCGATACCGATAGTCTCAAC TCTCAAGAGGAGAATTACCT
Downstream 100 bases:
>100_bases GCAAGCGTCCCTCATCTGAGAACACACGGTCCCTGACTGCCTGTTAGGGACTTCAAGTATTTGACTCAAGGAGATTAATT ATAATGAATATGACTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMFNNNNWKLSVTDINLYENTVSLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEALAEAGVTIGNFFSNDLMTAYQ RRQMNKRAEAERIAKELASQKERTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRAAIVADLESGGNWM DSL
Sequences:
>Translated_163_residues MMFNNNNWKLSVTDINLYENTVSLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEALAEAGVTIGNFFSNDLMTAYQ RRQMNKRAEAERIAKELASQKERTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRAAIVADLESGGNWM DSL >Mature_163_residues MMFNNNNWKLSVTDINLYENTVSLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEALAEAGVTIGNFFSNDLMTAYQ RRQMNKRAEAERIAKELASQKERTREMFMTEDEWQKELQRREQVKAERRTYGENLRSATHSAGRSRAAIVADLESGGNWM DSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18560; Mature: 18560
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFNNNNWKLSVTDINLYENTVSLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEAL CCCCCCCCEEEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AEAGVTIGNFFSNDLMTAYQRRQMNKRAEAERIAKELASQKERTREMFMTEDEWQKELQR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REQVKAERRTYGENLRSATHSAGRSRAAIVADLESGGNWMDSL HHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCC >Mature Secondary Structure MMFNNNNWKLSVTDINLYENTVSLDGQSYPLSLAIKTLIPGYLSGLPSTSREAMELLEAL CCCCCCCCEEEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AEAGVTIGNFFSNDLMTAYQRRQMNKRAEAERIAKELASQKERTREMFMTEDEWQKELQR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REQVKAERRTYGENLRSATHSAGRSRAAIVADLESGGNWMDSL HHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA