Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is gutM
Identifier: 30064065
GI number: 30064065
Start: 2796929
End: 2797288
Strand: Direct
Name: gutM
Synonym: S2920
Alternate gene names: 30064065
Gene position: 2796929-2797288 (Clockwise)
Preceding gene: 30064064
Following gene: 30064066
Centisome position: 60.81
GC content: 54.44
Gene sequence:
>360_bases ATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTT TAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCGTGGACCGTTCCAGCGGGCGCTTTAAACCGCGGGTCG TGGTCGCCATCGCGCTGGACGATCAGCAGTGCATCGTCGACACCTTGTTTATGAAAGGACTGACTGTCTTCGCCCGACCG CAAAAAATTCCCGCAATTACCGGCATGCATGCGGGTGATTTACAGCCCGATGTGATCTTTCCCCATGATCCACTATCACA GAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAA
Upstream 100 bases:
>100_bases CAGCGGAGATCCGTTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGC CACTACATTAAGGAAAAGTT
Downstream 100 bases:
>100_bases TTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCA GCGTCAGGCCGCCATTCTGG
Product: DNA-binding transcriptional activator GutM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVDRSSGRFKPRVVVAIALDDQQCIVDTLFMKGLTVFARP QKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG
Sequences:
>Translated_119_residues MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVDRSSGRFKPRVVVAIALDDQQCIVDTLFMKGLTVFARP QKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG >Mature_119_residues MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVDRSSGRFKPRVVVAIALDDQQCIVDTLFMKGLTVFARP QKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG
Specific function: Positive regulator for glucitol operon expression [H]
COG id: COG4578
COG function: function code K; Glucitol operon activator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789058, Length=119, Percent_Identity=98.3193277310924, Blast_Score=234, Evalue=8e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009693 [H]
Pfam domain/function: PF06923 GutM [H]
EC number: NA
Molecular weight: Translated: 12958; Mature: 12958
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVDRSSGRFKPRVVVAIALD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC DQQCIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG CCHHHHHHHHHHCCCEEECCCCCCEECCCCCCCCCCCEECCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVDRSSGRFKPRVVVAIALD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC DQQCIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG CCHHHHHHHHHHCCCEEECCCCCCEECCCCCCCCCCCEECCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3062173; 9205837; 9278503 [H]