Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is tyrA
Identifier: 30064000
GI number: 30064000
Start: 2732233
End: 2733354
Strand: Reverse
Name: tyrA
Synonym: S2837
Alternate gene names: 30064000
Gene position: 2733354-2732233 (Counterclockwise)
Preceding gene: 30064001
Following gene: 30063995
Centisome position: 59.43
GC content: 52.05
Gene sequence:
>1122_bases ATGGTTGCTGAATTGACCGCATTACGCGATCAAATTGATGAAGTCGATAAAGCGCTGCTGAATTTATTAGCGAAGCGTCT GGAACTGGTTGCTGAAGTGGGCAAGGTGAAAAGCCGCTTTGGACTGCCTATTTATGTTCCGGAGCGCGAGGCATCTATGT TGGCCTCGCGTCGTGCAGAGGCGGAAGCTCTGGGTGTACCGCCAGATCTGATTGAGGATGTTTTGCGTCGGGTGATGCGT GAATCTTACTCCAGTGAAAACGACAAAGGATTTAAAACACTTTGTCCGTCACTGCGTCCGGTGGTTATCGTCGGCGGTGG CGGTCAGATGGGACGCCTGTTCGAGAAGATGCTGACACTATCGGGTTATCAGGTGCGGATTCTGGAGCAACATGACTGGG ATCGAGCGGCTGATATTGTTGCCGATGCCGGAATGGTGATTGTTAGTGTGCCAATCCACGTTACTGAGCAAGTTATCGGC AAATTACCGCCTTTACCGAAAGATTGTATTCTGGTTGATCTGGCATCAGTGAAAAATGGACCATTACAGGCCATGCTGGC GGCGCACGATGGCCCGGTACTGGGGTTACACCCGATGTTCGGCCCGGACAGCGGTAGCCTGGCAAAGCAAGTTGTGGTCT GGTGTGATGGACGTAAGCCGGAAGCATACCAATGGTTTCTGGAGCAAATTCAGGTCTGGGGCGCTCGGTTGCATCGTATT AGCGCTGTCGAGCACGATCAGAATATGGCGTTTATTCAGGCTCTGCGCCACTTTGCTACTTTTGCTTACGGGCTGCACCT GGCAGAAGAAAATGTTCAGCTTGAGCAACTTCTGGCGCTCTCTTCGCCGATTTACCGCCTTGAGCTGGCGATGGTCGGGC GACTGTTTGCTCAGGATCCGCAGCTTTATGCCGACATCATTATGTCGTCAGAGCGTAATCTGGCGTTAATCAAACGTTAC TATAAGCGTTTCGGCGAGGCGATTGAGTTGCTGGAGCAGGGCGATAAGCAGGCGTTTATTGACAGTTTCCGCAAGGTGGA GCACTGGTTCGGCGATTACGCACAGCGTTTTCAGAGTGAAAGCCGCGTGTTATTGCGTCAGGCGAATGACAATCGCCAGT AA
Upstream 100 bases:
>100_bases GATGCCTGCATTAGCTGGGAAATGACCGATGCCTTGCTGCGTGAAATTCATCAGGATCTGAACGGGCAGCTGACGGCTCG CGTGGCTTAAGAGGTTTATT
Downstream 100 bases:
>100_bases TAATCCAGTGCCGGATGATTCACATCATCCGGCACCTTTTCATCAGGTTGGATCAACAGGCACTACGTTCTCACTTGGGT AACAGCCCAATACCTTCATT
Product: bifunctional chorismate mutase/prephenate dehydrogenase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGKVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMR ESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRY YKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ
Sequences:
>Translated_373_residues MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGKVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMR ESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRY YKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ >Mature_373_residues MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGKVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMR ESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRY YKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=373, Percent_Identity=99.4638069705094, Blast_Score=758, Evalue=0.0,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR008244 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR011277 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01817 CM_2; PF02153 PDH [H]
EC number: =5.4.99.5; =1.3.1.12 [H]
Molecular weight: Translated: 42014; Mature: 42014
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGKVKSRFGLPIYVPEREASMLASRRAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH AEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTL HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHC SGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNG CCCEEEEECCCCCHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCHHHEEEHHHCCCC PLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI CHHHHHHHCCCCEEEECCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHH SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCH QLYADIIMSSERNLALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRVLLRQANDNRQ HHHHHHHCCCCCC >Mature Secondary Structure MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGKVKSRFGLPIYVPEREASMLASRRAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH AEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTL HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHHHC SGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNG CCCEEEEECCCCCHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCHHHEEEHHHCCCC PLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI CHHHHHHHCCCCEEEECCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHH SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCH QLYADIIMSSERNLALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRVLLRQANDNRQ HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6396419; 9205837; 9278503 [H]