Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30063958
Identifier: 30063958
GI number: 30063958
Start: 2686443
End: 2687048
Strand: Reverse
Name: 30063958
Synonym: S2790
Alternate gene names: NA
Gene position: 2687048-2686443 (Counterclockwise)
Preceding gene: 30063959
Following gene: 30063957
Centisome position: 58.42
GC content: 49.83
Gene sequence:
>606_bases GTGCAGAATGTGGCTGCCACTGTGCTTGCGCAGTATGCTGCCAGCCCCCGACTCAATGCCCTCATTAACAGCTTTAACGC AGCGCTTTCCCCCGACAGTTTTATCAGTGATTTTTATGGTCTTATCTGGAACATCGATACCGCAGAAAAGTATGGTCTTG ATGTCTGGGGAAAGATTGTGGGTGTCAGTCGCTGGCTGACGGTAAAGGACGATTTTAATTACCTGGGCTTCAGCGAGTCC AGGATGGACACCCCGGTAATGGATGATCCCTGTCCGTTTAATCAGGCACCGTTTTACAACGGAAAATCGGATACCCGGAC TGTTGACCTGTCTGATGCTGTATACCGGCGGCTGATACTGATGAAAGCCATGTCGAACATTACTGACTGTTCCGTTCCGG ATATTAACCTGATGCTGAGATTTATGTTCGGAAAAAAACGCCGGGCTTATGTTCTGAATAATGGCGGGCTGAGGATGAGT TACGTCTTTGAGTCCGCGCTCTCGTTGGCAGAACTGGCGATTATCCAGTCGTCGGGTGCACTGCCATCCCCGCCGGGTGT TTATGTTTCAGTAGTTTTAAAGGAGTCCCGTAATGAAGGCCAGTGA
Upstream 100 bases:
>100_bases CGTGATGGTTCGTCATGGACAACGGCTGTCACTTTCGGGATAGATGAGATTCCGGTTCTGGATGTGTCGGATATCAGTGT GAAACTCCAGGAGGCATAAC
Downstream 100 bases:
>100_bases TAAACCCCGCCAGCTGGCGGTCCCCTTTGCGAGTACCGGAGATAAAAACCGTATCCCGGACAAGGCGACACAGCAGACCA GAGAGAGCGGTAATGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MQNVAATVLAQYAASPRLNALINSFNAALSPDSFISDFYGLIWNIDTAEKYGLDVWGKIVGVSRWLTVKDDFNYLGFSES RMDTPVMDDPCPFNQAPFYNGKSDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINLMLRFMFGKKRRAYVLNNGGLRMS YVFESALSLAELAIIQSSGALPSPPGVYVSVVLKESRNEGQ
Sequences:
>Translated_201_residues MQNVAATVLAQYAASPRLNALINSFNAALSPDSFISDFYGLIWNIDTAEKYGLDVWGKIVGVSRWLTVKDDFNYLGFSES RMDTPVMDDPCPFNQAPFYNGKSDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINLMLRFMFGKKRRAYVLNNGGLRMS YVFESALSLAELAIIQSSGALPSPPGVYVSVVLKESRNEGQ >Mature_201_residues MQNVAATVLAQYAASPRLNALINSFNAALSPDSFISDFYGLIWNIDTAEKYGLDVWGKIVGVSRWLTVKDDFNYLGFSES RMDTPVMDDPCPFNQAPFYNGKSDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINLMLRFMFGKKRRAYVLNNGGLRMS YVFESALSLAELAIIQSSGALPSPPGVYVSVVLKESRNEGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22321; Mature: 22321
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNVAATVLAQYAASPRLNALINSFNAALSPDSFISDFYGLIWNIDTAEKYGLDVWGKIV CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCHHHHHHHH GVSRWLTVKDDFNYLGFSESRMDTPVMDDPCPFNQAPFYNGKSDTRTVDLSDAVYRRLIL HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH MKAMSNITDCSVPDINLMLRFMFGKKRRAYVLNNGGLRMSYVFESALSLAELAIIQSSGA HHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCC LPSPPGVYVSVVLKESRNEGQ CCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MQNVAATVLAQYAASPRLNALINSFNAALSPDSFISDFYGLIWNIDTAEKYGLDVWGKIV CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCHHHHHHHH GVSRWLTVKDDFNYLGFSESRMDTPVMDDPCPFNQAPFYNGKSDTRTVDLSDAVYRRLIL HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH MKAMSNITDCSVPDINLMLRFMFGKKRRAYVLNNGGLRMSYVFESALSLAELAIIQSSGA HHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCC LPSPPGVYVSVVLKESRNEGQ CCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA