Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is 30063959
Identifier: 30063959
GI number: 30063959
Start: 2687050
End: 2687517
Strand: Reverse
Name: 30063959
Synonym: S2791
Alternate gene names: NA
Gene position: 2687517-2687050 (Counterclockwise)
Preceding gene: 30063962
Following gene: 30063958
Centisome position: 58.43
GC content: 52.14
Gene sequence:
>468_bases GTGTACGGCGGCAGCCCGGCAGATATCGCGGCGGCCATCTGGCGTAAGGCTCCGCCGGGTATTGATATGAATGGCAACAC AACGTTCACTGTTGCAGATAAGGAGTACGATCCGCCGTATCCTGAATACGTGATCAGCTGGCAGACACTCAAACCCGTCA GTCTGCATGTCAGTGTGACGCTGAAAAAAAGTGACTACCTGCCTTCAGATATTACCCGACAGGTACAGCAATCCGTGCTG GACGCATTTAATGGTACAGATGGTGGTCTGCGGGCAAGAGTTGCCTCTGTTGTCTCTGCCGGGCGCTACTATGCCGGCAT TTACAAAACCGATCCGGAACATATTGATATTCTGGGCCTTACTGTGAGCCGTGATGGTTCGTCATGGACAACGGCTGTCA CTTTCGGGATAGATGAGATTCCGGTTCTGGATGTGTCGGATATCAGTGTGAAACTCCAGGAGGCATAA
Upstream 100 bases:
>100_bases TAGAAAACGTGGTGGATGTTTACGTCACCCATAATCCGAAAAAAACAGAACAAAAAGCCGGAGTCAGTATCCATTAACAC CCGGTTCGCTTTATGTTGGC
Downstream 100 bases:
>100_bases CGTGCAGAATGTGGCTGCCACTGTGCTTGCGCAGTATGCTGCCAGCCCCCGACTCAATGCCCTCATTAACAGCTTTAACG CAGCGCTTTCCCCCGACAGT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MYGGSPADIAAAIWRKAPPGIDMNGNTTFTVADKEYDPPYPEYVISWQTLKPVSLHVSVTLKKSDYLPSDITRQVQQSVL DAFNGTDGGLRARVASVVSAGRYYAGIYKTDPEHIDILGLTVSRDGSSWTTAVTFGIDEIPVLDVSDISVKLQEA
Sequences:
>Translated_155_residues MYGGSPADIAAAIWRKAPPGIDMNGNTTFTVADKEYDPPYPEYVISWQTLKPVSLHVSVTLKKSDYLPSDITRQVQQSVL DAFNGTDGGLRARVASVVSAGRYYAGIYKTDPEHIDILGLTVSRDGSSWTTAVTFGIDEIPVLDVSDISVKLQEA >Mature_155_residues MYGGSPADIAAAIWRKAPPGIDMNGNTTFTVADKEYDPPYPEYVISWQTLKPVSLHVSVTLKKSDYLPSDITRQVQQSVL DAFNGTDGGLRARVASVVSAGRYYAGIYKTDPEHIDILGLTVSRDGSSWTTAVTFGIDEIPVLDVSDISVKLQEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16810; Mature: 16810
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGGSPADIAAAIWRKAPPGIDMNGNTTFTVADKEYDPPYPEYVISWQTLKPVSLHVSVT CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEE LKKSDYLPSDITRQVQQSVLDAFNGTDGGLRARVASVVSAGRYYAGIYKTDPEHIDILGL EECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEE TVSRDGSSWTTAVTFGIDEIPVLDVSDISVKLQEA EEECCCCCEEEEEEECCCCCCEEECCCCEEEEECC >Mature Secondary Structure MYGGSPADIAAAIWRKAPPGIDMNGNTTFTVADKEYDPPYPEYVISWQTLKPVSLHVSVT CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEE LKKSDYLPSDITRQVQQSVLDAFNGTDGGLRARVASVVSAGRYYAGIYKTDPEHIDILGL EECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEE TVSRDGSSWTTAVTFGIDEIPVLDVSDISVKLQEA EEECCCCCEEEEEEECCCCCCEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA