Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30063951
Identifier: 30063951
GI number: 30063951
Start: 2681284
End: 2681829
Strand: Reverse
Name: 30063951
Synonym: S2783
Alternate gene names: NA
Gene position: 2681829-2681284 (Counterclockwise)
Preceding gene: 30063952
Following gene: 30063949
Centisome position: 58.31
GC content: 56.96
Gene sequence:
>546_bases GTGACGTTTTTTTTTGACGACAGGGACCAGGCAGTCCCCTACACAGCCACCGCTGATGATGTCGCACCGACGGGTCAGCA AATCTGGCAGGAACTGCAAAGTGGCAAATGGGGTGAGATAGCCCCATTCACTGTGACACCAGAAATGCTGGAAGCGGCCA GAGAGGCCAGACGTCAGGAAATTGAAGCATGGCGCACAGAACAGGAGGCGAAGCCGTTCACGTTTGAATGGAACGGTCGT ATCTGGAATGCTGGCCCCGACTCACTGGGCCGCCTGTCCCCGGTAGTCATGCTGGCAAAATCTGTCACAGCACAAACACA TATGGCGTGGAGCGATGCCGATAATCAGCAGGTGAAACTGTCGATGCCGGAACTGGAAGAACTGGCGGAATCACAGAAGA CCGCTTTGCTTACCGAAGCGGAGTCTGTCATCCGGCAGCCGGGGCGTGCTGTCAGGCTGAACAGGGAAACGGATGAATCA GGGGAGGCCCGGGGGCGGGCCTCCGTTTTTCCGGAGTCAGTCCGGTCTGTGGTTTATGCGATGTGA
Upstream 100 bases:
>100_bases GCGCAATGCCCGGGCTTTTTATTCGCACATCGAGAGGAATGCACCGTGGAAATTAAAAAAATCATTAATCCCCGTTATAC CGAAAGTGGCGCAGTAGACT
Downstream 100 bases:
>100_bases TTATGAATGGTGCAGTTGTGAGCCGTTTTCAGGCAATCGCAGGGCCAGTACCTCGTCAGTCAGCTGACGGTAAATCTGCT GTTCAGTCTCACGCATCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTFFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRTEQEAKPFTFEWNGR IWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAESQKTALLTEAESVIRQPGRAVRLNRETDES GEARGRASVFPESVRSVVYAM
Sequences:
>Translated_181_residues MTFFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRTEQEAKPFTFEWNGR IWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAESQKTALLTEAESVIRQPGRAVRLNRETDES GEARGRASVFPESVRSVVYAM >Mature_180_residues TFFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQEIEAWRTEQEAKPFTFEWNGRI WNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKLSMPELEELAESQKTALLTEAESVIRQPGRAVRLNRETDESG EARGRASVFPESVRSVVYAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20363; Mature: 20232
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQE CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHH IEAWRTEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKL HHHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEE SMPELEELAESQKTALLTEAESVIRQPGRAVRLNRETDESGEARGRASVFPESVRSVVYA ECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHC M C >Mature Secondary Structure TFFFDDRDQAVPYTATADDVAPTGQQIWQELQSGKWGEIAPFTVTPEMLEAAREARRQE CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHH IEAWRTEQEAKPFTFEWNGRIWNAGPDSLGRLSPVVMLAKSVTAQTHMAWSDADNQQVKL HHHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEE SMPELEELAESQKTALLTEAESVIRQPGRAVRLNRETDESGEARGRASVFPESVRSVVYA ECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHC M C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA