| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yejO
Identifier: 30063632
GI number: 30063632
Start: 2289047
End: 2291557
Strand: Reverse
Name: yejO
Synonym: S2406
Alternate gene names: 30063632
Gene position: 2291557-2289047 (Counterclockwise)
Preceding gene: 30063634
Following gene: 30063629
Centisome position: 49.82
GC content: 48.67
Gene sequence:
>2511_bases TTGGCATCAACAGTTGAGTATGGTGAGACAGTTGATGGTGTTATCCTGGAAAAAGATATCCAGCTGGTTTATGGGACCGC CAATAATACGAAAATCAATCCTGGCGGAGAACAGCATATAAAAGAATTTGGTGTAAGTAGTAATACTGAAATTAACGGAG GGTATCAATACATTGAAATGAATGGTACCGCAGAATACTCAGTATTAAATGATGGTTATCAAATTGTTCAAATGGGTGGC GCGGCAAACCAGACTACCCTCAATAATGGTGTGCTACAGGTTTATGGCCCAGCGAATGATACCACGATTAAAGGCGGGCG CTTAATCGTTGAAAAAGATGGGGGGGCCGTTTTTGCCGCTATCGAAAAGGGAGGACTACTGGAGGTTAAAGAGGGGGGAT TTGCGCTTGCGGTAGATCAGAAAACAGGCGGTGCTATTAAAACAACCACGCGGGCCATGGAGGTATTCGGAACAAACCGT CTCGGTCAGTTCGATATCAAGAATGGTATTGCTAATAATATGTTGTTGGAAAACGGCGGAAGTTTGCGAGTTGAAGAAAA TGACTTCGCTTATAATACTACTGTGGATAGTGGCGGCTTACTGGAGGTTATGGATGGCGGGACTGCAACTGGCGTTGATA AAAAAGCAGGCGGGAAATTAATTGTCTCAACGAATGCGCTGGAAGTGAGTGGTACAAACAGTAAAGGCCAATTTAGTATA AAGGATGGTGTGTCAAAAAATTATGAACTGGATGATGGTTCCGGGCTCATTGTTATGGAGGACACGCAGGCCATTGACAC TATCCTTGATGAGCATGCCACTATGCAATCGCTGGGAAAGGATACTGGTACGAAAGTGCAGGCAAATGCGGTATATGATC TCGGTCGATCAGACCAGAATGGAAGTATCACGTATTCCTCAAAAGCCATCTCTGAAAATATGGTAATCAACAATGGCCGC GCTAATGTCTGGGCTGGCACAATGGTTAACGTGTCAGTCAGAGGGAATGATGGCATTCTTGAGGTCATGAAGCCGCAAAT AAATTATGCACCCGCTATGTTGGTGGGTAAGGTAGTGGTTTCTGAGGGCGCTTCTTTTAGAACGCATGGTGCCGTGGATA CCAGCAAAGCGGACGTTTCGCTCGAAAATAGCGCATGGACCATCATTGCCGATATCACTACGACGAACCAAAACACTCGC CTCAACTTAGCCAACCTTGCGATGTCCGGCGCAAATGTGATTATGATGGCTGAGCCAGTGACTCGTTCATCTGTGACGGC AAGTGCGGAAAATTTCATTACGTTGACCACCAATACCCTGTCGGGAAACGGCAATTTTTATATGCGTACCGATATGGCCA ATCATCAGAGCGATCAGCTCAACGTCACCGGTCAGGCAACAGGTGATTTCAAAATATTCGTGACGGACACCGGTGCCAGC CCGGCAGCAGGAGATAGCCTTACACTGGTAACAACGGGCGGCGGTGATGCTGCATTTACGTTGGGCAATGCCGGAGGCGT TGTTGATATCGGTACGTATGAATATACCTTGCTGGATAATGGCAACCATAGCTGGAGCCTCGCAGAGAATCGCGCGCAAA TTACCCCTTCAACCACTGATGTGCTGAACATGGCAGCCGCACAACCGCTGGTATTTGATGCAGAACTGGACACCGTGCGT GAGCGTCTTGGTAGCGTAAAAGGCGTTAGTTACGATACGGTGATGTGGAGTTCGGCAATTAACACCCGCAACAACGTGAC CACTGATGCGGGAGCTGGTTTTGAGCAAACATTGACGGGCCTGACGCTCGGTATCGATAGCCGTTTCTCCCGTGAAGAAA GCAGTACAATTCGCGGCTTGTTCTTTGGTTACTCTCATTCTGATATTGGTTTTGATCGCGGCGGAAAAGGTAATATCGAT AGCTATACCCTGGGGGCTTATGCCGGTTGGGAGCATCAGAACGGTGCCTATGTTGATGGGGTGGTGAAAGTTGACCGTTT TGCCAACACCATCCATGGCAAGATGAGTAATGGGGCAACAGCGTTTGGCGATTACAATAGTAACGGCGCGGGTGCTCATG TTGAGAGCGGGTTCCGTTGGGTTGACGGATTGTGGAGTGTTAGACCCTATCTGGCCTTTACCGGCTTTACCACAGATGGT CAGGACTACACGTTATCAAACGGCATGCGCGCGGATGTGGGAAATACCCGGATATTACGCGCTGAAGCGGGAACGGCGGT AAGCTATCACATGGACCTGCAAAACGGTACGACGCTGGAACCCTGGCTGAAAGCCGCCGTGCGTCAGGAATACGCCGATT CTAACCAGGTGAAAGTTAATGACGATGGCAAATTTAATAATGATGTGGCTGGAACCAGTGGCGTTTATCAGGCTGGGATA AGGTCATCGTTTACCCCGACGTTAAGCGGTCATTTGTCAGTCAGCTATGGCAATGGCGCAGGGGTAGAATCGCCGTGGAA TACTCAGGCGGGTGTGGTCTGGACGTTCTGA
Upstream 100 bases:
>100_bases TTCATAGGATGAAAGCTCAATGCATCAATCTGGTTCTGTTTCTCTTTGTCGTTCCGCAATATCTGTTCTGGTGGCTACAG CGTTATATTCACCCATAGCA
Downstream 100 bases:
>100_bases TAACAGAAAATAAACAGGCTGTGATGTGTCACGGTCTGTTTATCGAATTAATTGCAGATATAAAAAAACCAACCGTAAGG GTTGGTTTTTTCTTGGGATT
Product: putative ATP-binding component of a transport system
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 836; Mature: 835
Protein sequence:
>836_residues MASTVEYGETVDGVILEKDIQLVYGTANNTKINPGGEQHIKEFGVSSNTEINGGYQYIEMNGTAEYSVLNDGYQIVQMGG AANQTTLNNGVLQVYGPANDTTIKGGRLIVEKDGGAVFAAIEKGGLLEVKEGGFALAVDQKTGGAIKTTTRAMEVFGTNR LGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGR ANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSAWTIIADITTTNQNTR LNLANLAMSGANVIMMAEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVR ERLGSVKGVSYDTVMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNID SYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGI RSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF
Sequences:
>Translated_836_residues MASTVEYGETVDGVILEKDIQLVYGTANNTKINPGGEQHIKEFGVSSNTEINGGYQYIEMNGTAEYSVLNDGYQIVQMGG AANQTTLNNGVLQVYGPANDTTIKGGRLIVEKDGGAVFAAIEKGGLLEVKEGGFALAVDQKTGGAIKTTTRAMEVFGTNR LGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGR ANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSAWTIIADITTTNQNTR LNLANLAMSGANVIMMAEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVR ERLGSVKGVSYDTVMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNID SYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGI RSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF >Mature_835_residues ASTVEYGETVDGVILEKDIQLVYGTANNTKINPGGEQHIKEFGVSSNTEINGGYQYIEMNGTAEYSVLNDGYQIVQMGGA ANQTTLNNGVLQVYGPANDTTIKGGRLIVEKDGGAVFAAIEKGGLLEVKEGGFALAVDQKTGGAIKTTTRAMEVFGTNRL GQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSIK DGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGRA NVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSAWTIIADITTTNQNTRL NLANLAMSGANVIMMAEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASP AAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRE RLGSVKGVSYDTVMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNIDS YTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQ DYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIR SSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
Organism=Escherichia coli, GI87082145, Length=905, Percent_Identity=41.6574585635359, Blast_Score=623, Evalue=1e-179, Organism=Escherichia coli, GI48994897, Length=562, Percent_Identity=30.7829181494662, Blast_Score=127, Evalue=4e-30, Organism=Escherichia coli, GI1787954, Length=429, Percent_Identity=28.9044289044289, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1787452, Length=666, Percent_Identity=23.7237237237237, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR006315 - InterPro: IPR012332 - InterPro: IPR011050 - InterPro: IPR004899 - InterPro: IPR003991 [H]
Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]
EC number: NA
Molecular weight: Translated: 88391; Mature: 88260
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTVEYGETVDGVILEKDIQLVYGTANNTKINPGGEQHIKEFGVSSNTEINGGYQYIEM CCCCCCCCCCCCCEEEEECEEEEEECCCCCEECCCHHHHHHHHCCCCCCEECCCEEEEEE NGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGPANDTTIKGGRLIVEKDGGAVFAA CCCEEEEEECCCEEEEEECCCCCCCEECCCEEEEEECCCCCEECCCEEEEECCCCEEEEE IEKGGLLEVKEGGFALAVDQKTGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGG ECCCCEEEEECCCEEEEEECCCCCEEEEHHHHHHHHCCCCCCCEECCCCCCCCEEEECCC SLRVEENDFAYNTTVDSGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI EEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEECCCCCCEEEE KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQN CCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCC GSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVV CEEEEECCCCCCCEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHEEHHC SEGASFRTHGAVDTSKADVSLENSAWTIIADITTTNQNTRLNLANLAMSGANVIMMAEPV CCCCCEEECCCCCCCCCCEEECCCCEEEEEEEEECCCCCEEEEEHEEECCCCEEEEECCC TRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS CCCCEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCC PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTD CCCCCEEEEEEECCCCEEEEECCCCCEEEECCEEEEEEECCCCCEEEECCCEEECCCHHH VLNMAAAQPLVFDAELDTVRERLGSVKGVSYDTVMWSSAINTRNNVTTDAGAGFEQTLTG HHHHHHCCCEEEECHHHHHHHHHCCCCCCEEHHEEEEHHCCCCCCCCCCCCCCHHHHHCE LTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDG EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE VVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG EEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEECCCC QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVN CCEEECCCCEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEC DDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure ASTVEYGETVDGVILEKDIQLVYGTANNTKINPGGEQHIKEFGVSSNTEINGGYQYIEM CCCCCCCCCCCCEEEEECEEEEEECCCCCEECCCHHHHHHHHCCCCCCEECCCEEEEEE NGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGPANDTTIKGGRLIVEKDGGAVFAA CCCEEEEEECCCEEEEEECCCCCCCEECCCEEEEEECCCCCEECCCEEEEECCCCEEEEE IEKGGLLEVKEGGFALAVDQKTGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGG ECCCCEEEEECCCEEEEEECCCCCEEEEHHHHHHHHCCCCCCCEECCCCCCCCEEEECCC SLRVEENDFAYNTTVDSGGLLEVMDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSI EEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECEEEEECCCCCCEEEE KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQN CCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCC GSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVV CEEEEECCCCCCCEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHEEHHC SEGASFRTHGAVDTSKADVSLENSAWTIIADITTTNQNTRLNLANLAMSGANVIMMAEPV CCCCCEEECCCCCCCCCCEEECCCCEEEEEEEEECCCCCEEEEEHEEECCCCEEEEECCC TRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS CCCCEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEECCCC PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTD CCCCCEEEEEEECCCCEEEEECCCCCEEEECCEEEEEEECCCCCEEEECCCEEECCCHHH VLNMAAAQPLVFDAELDTVRERLGSVKGVSYDTVMWSSAINTRNNVTTDAGAGFEQTLTG HHHHHHCCCEEEECHHHHHHHHHCCCCCCEEHHEEEEHHCCCCCCCCCCCCCCHHHHHCE LTLGIDSRFSREESSTIRGLFFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDG EEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE VVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG EEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEECCCC QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVN CCEEECCCCEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEC DDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]