Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is mglC
Identifier: 30063591
GI number: 30063591
Start: 2238759
End: 2239769
Strand: Reverse
Name: mglC
Synonym: S2362
Alternate gene names: 30063591
Gene position: 2239769-2238759 (Counterclockwise)
Preceding gene: 30063592
Following gene: 30063584
Centisome position: 48.7
GC content: 50.25
Gene sequence:
>1011_bases ATGAGTGCGTTAAATAAGAAAAGTTTTCTTACTTACCTGAAAGAGGGCGGTATTTACGTCGTTCTTTTAGTTTTGCTGGC GATTATTATTTTCCAGGACCCAACATTTTTAAGTCTGTTGAACTTAAGTAATATTCTCACCCAGTCATCGGTGCGTATTA TTATCGCGCTCGGTGTGGCAGGGTTAATTGTCACCCAGGGGACCGATCTTTCTGCTGGTCGTCAGGTAGGGCTGGCGGCA GTGGTGGCTGCGACATTATTGCAGTCCATGGATAACGCCAACAAAGTGTTCCCGGAAATGGCGACGATGCCGATTGCGCT GGTTATTCTGATTGTCTGTGCCATTGGTGCGGTGATCGGTTTGATCAACGGTCTGATTATCGCTTATCTCAACGTGACGC CGTTCATTACCACGCTCGGCACGATGATCATCGTCTATGGCATCAACTCGCTCTATTACGACTTTGTCGGGGCGTCGCCA ATTTCTGGTTTTGACAGTGGCTTCTCTACCTTTGCTCAGGGCTTTCTCGCGCTGGGGAGTTTCCGTCTCTCTTACATCAC CTTCTACGCGTTGATTGCGGTGGCGTTCGTCTGGGTGTTGTGGAACAAAACCCGCTTCGGTAAGAACATTTTTGCCATTG GCGGTAACCCGGAAGCGGCAAAAATATCTGGTGTCAACGTCGGCCTGAACCTGCTGATGATCTACGCGTTGTCTGGCGTG TTCTATGCCTTTGGCGGGATGTTAGAAGCCGGACGTATCGGCTCTGCCACCAACAACCTCGGCTTTATGTATGAGCTGGA TGCTATCGCGGCGTGCGTGGTAGGCGGTGTATCGTTCAGCGGCGGTGTGGGGACGGTGATTGGCGTGGTGACCGGGGTAA TTATTTTTACCGTCATCAACTATGGCCTGACGTATATCGGCGTAAACCCATACTGGCAGTACATCATCAAAGGGGCGATT ATTATCTTCGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAGTGA
Upstream 100 bases:
>100_bases GAGCAATGGTCTCGTTTCCGGAATTGTCGATACAAAAACAACAACGCAAAACGAAATTCTGCGTCTTGCGTCTTTGCACC TTTAAGATTAGGGGCTTCCC
Downstream 100 bases:
>100_bases TGTGATTGCGGATATTGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTTCTTAAACTTCAC TTCCCCGAGCTCAATACAAC
Product: beta-methylgalactoside transporter inner membrane component
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAA VVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP ISGFDSGFSTFAQGFLALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKISGVNVGLNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAI IIFAVALDSLKYARKK
Sequences:
>Translated_336_residues MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAA VVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP ISGFDSGFSTFAQGFLALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKISGVNVGLNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAI IIFAVALDSLKYARKK >Mature_335_residues SALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAV VAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPI SGFDSGFSTFAQGFLALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKISGVNVGLNLLMIYALSGVF YAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAII IFAVALDSLKYARKK
Specific function: Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4211
COG function: function code G; ABC-type glucose/galactose transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788471, Length=336, Percent_Identity=99.4047619047619, Blast_Score=649, Evalue=0.0, Organism=Escherichia coli, GI1790191, Length=323, Percent_Identity=34.6749226006192, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1789992, Length=376, Percent_Identity=30.8510638297872, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1790524, Length=332, Percent_Identity=33.433734939759, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1788896, Length=332, Percent_Identity=32.2289156626506, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI145693152, Length=321, Percent_Identity=30.2180685358255, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787794, Length=304, Percent_Identity=32.2368421052632, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787793, Length=307, Percent_Identity=30.2931596091205, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI87082395, Length=304, Percent_Identity=31.5789473684211, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI145693214, Length=269, Percent_Identity=31.9702602230483, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 35579; Mature: 35448
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEHHH GLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIG HHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFLALGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKISGVNVGLNLLMIYALSGV HHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHH FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN HHHHHCHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEHHH GLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIG HHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFLALGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKISGVNVGLNLLMIYALSGV HHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHH FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN HHHHHCHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1719366; 9278503 [H]