| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is wcaK
Identifier: 30063496
GI number: 30063496
Start: 2105618
End: 2106898
Strand: Reverse
Name: wcaK
Synonym: S2231
Alternate gene names: 30063496
Gene position: 2106898-2105618 (Counterclockwise)
Preceding gene: 30063497
Following gene: 30063495
Centisome position: 45.81
GC content: 54.25
Gene sequence:
>1281_bases ATGAAATTACTTATTCTGGGCAACCACACTTGCGGCAATCGTGGCGACAGCGCCATCTTGCGCGGCTTACTTGATGCCAT CAACATCCTCAATCCACATACCGAAGTGGACGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTGCTCAACCGCCCGG TAATGGGCGATCCGCTGTTCCTGCAGATGACACAACACAATAGCGCGGCGGGCGTTGTCGGGCGCATTAAAAAAGTCCTC CGTCGCCGCTACCAGCATCAGGTATTGCTCTCACGCGTCACCGACACTGGCAAGCTGCGCAATATCGCCATCGCCCAGGG ATTCACCGACTTCGTGCGCCTGCTGTCAGGTTACGACGCCATTATTCAGGTCGGCGGATCGTTTTTTGTCGATCTCTACG GCGTGCCGCAGTTTGAACATGCGCTTTGCACATTTATGGCGAAAAAGCCGCTGTTTATGATTGGTCACAGCGTCGGCCCC TTCCAGGATGAGCAATTTAACCAACTGGCGAACTATGTCTTTGGTCACTGCGACGCGCTGATCCTGCGCGAATCGGTCAG CCTTGATTTGATGAAACGCAGAAATATCACCACCGCAAAAGTGGAACATGGCGTCGATACCGCGTGGCTGGTCGATCACC ACACCGAAGACTTCACCGCCAGCTATGCCGTTCAACACTGGCTGGACGTTGCCGCACAACAGAAAACAGTGGCAATTACC CTGCGCGAACTGGCACCGTTCGACAAACGTCTCGGCACCACTCAACAAGCGTATGAAAAAGCCTTTGCCGGGGTGGTCAA TCGCATTCTCGATGAAGGCTATCAGGTGATTGCGCTCTCCACCTGTACGGGTATCGACAGCTATAACAAAGACGACCGCA TGGTGGCGCTCAATCTGCGCCAGCACATCAGCGATCCTGCCCGTTACCACGTAGTGATGGATGAACTCAACGATCTGGAA ATGGGCAAAATTCTCGGAGCCTGTGAACTCACCGTCGGTACGCGCCTGCACTCCGCCATTATCTCAATGAACTTTGCTAC TCCGGCGATTGCCATCAACTATGAACATAAATCCGCCGGGATTATGCAGCAGCTGGGACTGCCAGAGATGGCGATTGATA TTCGTCATTTACTGGACGGCAGCCTGCAAGCGATGGTTGCGGATACCTTAGGCCAGCTTCCGGTGCTGAACGCTCGATTT AACGAAGCCGTCAGTCGCGAACGTCAGACGGGAATGCAGATGGTGCAGTCTGTGCTTGAGCGCATCGGGGAGGTGAAATG A
Upstream 100 bases:
>100_bases CCTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAAAAACGGCAACGAACACAACAAACACAGCCTCACCTGGC ATCAAATTTATGAGGAAAAA
Downstream 100 bases:
>100_bases AGGTCGGCTTCTTCTTATTGAAATTCCCGCTGTCGTCGGAAACCTTCGTCCTCAATCAAATTACCGCGTTTATTGATATG GGCTTTGAAGTGGAGATTGT
Product: putative pyruvyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKLLILGNHTCGNRGDSAILRGLLDAINILNPHTEVDVMSRYPVSSSWLLNRPVMGDPLFLQMTQHNSAAGVVGRIKKVL RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP FQDEQFNQLANYVFGHCDALILRESVSLDLMKRRNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAIT LRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLE MGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPVLNARF NEAVSRERQTGMQMVQSVLERIGEVK
Sequences:
>Translated_426_residues MKLLILGNHTCGNRGDSAILRGLLDAINILNPHTEVDVMSRYPVSSSWLLNRPVMGDPLFLQMTQHNSAAGVVGRIKKVL RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP FQDEQFNQLANYVFGHCDALILRESVSLDLMKRRNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAIT LRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLE MGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPVLNARF NEAVSRERQTGMQMVQSVLERIGEVK >Mature_426_residues MKLLILGNHTCGNRGDSAILRGLLDAINILNPHTEVDVMSRYPVSSSWLLNRPVMGDPLFLQMTQHNSAAGVVGRIKKVL RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP FQDEQFNQLANYVFGHCDALILRESVSLDLMKRRNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAIT LRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLE MGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPVLNARF NEAVSRERQTGMQMVQSVLERIGEVK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788358, Length=426, Percent_Identity=98.1220657276995, Blast_Score=871, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 47485; Mature: 47485
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLILGNHTCGNRGDSAILRGLLDAINILNPHTEVDVMSRYPVSSSWLLNRPVMGDPLF CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCCCEE LQMTQHNSAAGVVGRIKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDA EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHCCCHH IIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDAL HHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH ILRESVSLDLMKRRNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAIT HHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE LRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLR HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEHH QHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAG HHCCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH IMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPVLNARFNEAVSRERQTGMQMVQSVLE HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RIGEVK HHCCCC >Mature Secondary Structure MKLLILGNHTCGNRGDSAILRGLLDAINILNPHTEVDVMSRYPVSSSWLLNRPVMGDPLF CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCCCEE LQMTQHNSAAGVVGRIKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDA EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHCCCHH IIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDAL HHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH ILRESVSLDLMKRRNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAIT HHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE LRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLR HHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEHH QHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAG HHCCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH IMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPVLNARFNEAVSRERQTGMQMVQSVLE HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RIGEVK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759852; 9278503 [H]