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The map label for this gene is rfbF

Identifier: 30063487

GI number: 30063487

Start: 2095893

End: 2096783

Strand: Reverse

Name: rfbF

Synonym: S2221

Alternate gene names: 30063487

Gene position: 2096783-2095893 (Counterclockwise)

Preceding gene: 30063488

Following gene: 30063486

Centisome position: 45.59

GC content: 32.66

Gene sequence:

>891_bases
ATGAATAGTAATATTTACGCTGTCATTGTGACATATAATCCCGAACTTAAAAATCTGAATGCACTGATCACTGAACTAAA
GGAGCAAAATTGTTACGTTGTAGTAGTCGATAATAGGACTAATTTCACCTTGAAAGATAAATTAGCAGACATTGAAAAAG
TTCATTTAATTTGTCTTGGTAGGAATGAAGGTATAGCAAAAGCACAAAATATTGGGATTCGATATTCTCTTGAAAAAGGG
GCAGAGAAGATAATTTTTTTTGATCAAGATAGCCGTATTCGCAATGAGTTTATCAAAAAACTTTCCTGCTATATGGATAA
TGAAAATGCAAAAATAGCTGGCCCAGTTTTTATTGATAGAGATAAGTCACATTATTATCCTATTTGTAATATCAAAAAAA
ATGGTCTTCGAGAGAAAATTCATGTCACTGAAGGACAGACACCGTTTAAAAGTTCAGTAACAATCTCATCCGGAACCATG
GTTTCAAAAGAAGTTTTTGAGATTGTTGGAATGATGGATGAGGAACTTTTTATTGATTATGTCGATACAGAATGGTGTCT
TAGATGCTTAAACTATGGCATATTAGTTCATATCATTCCTGATATAGAAATGGTTCATGCTATTGGGGATAAGTCAGTAA
AAATCTGTGGGATTAACATACCAATTCACTCGCCAGTACGTCGTTATTATCGAGTAAGAAATGCATTTCTTTTGCTTAGA
AAAAATCATGTGCCTCTTTTACTCTCTATTAGGGAAGTTGTTTTTTCTTTAATTCATACGACTTTAATTATCGCAACTCA
AAAAAATAAAATTGAATATATGAAAAAACATATTTTGGCTACGCTGGATGGAATAAGAGGAATTACTGGGGGCGGTCGTT
ATAATGCATAG

Upstream 100 bases:

>100_bases
TACGTGTAATTTTAGATGCTCTGTTATTACAATGGCTTTATACTAGAATGTGTTCTGTATATGAAAACTAAAATTAACCA
ATTACTGAGTCACTTGGATA

Downstream 100 bases:

>100_bases
TTCTGATCAAAAAAGAGTAGCTGTACTTATGGCTACGTATAATGGCGAATGCTGGATTGAGGAACAATTAAAAAGTATTA
TTGAACAAAAAGATGTAGAC

Product: dTDP-rhamnosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLGRNEGIAKAQNIGIRYSLEKG
AEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDRDKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTM
VSKEVFEIVGMMDEELFIDYVDTEWCLRCLNYGILVHIIPDIEMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA

Sequences:

>Translated_296_residues
MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLGRNEGIAKAQNIGIRYSLEKG
AEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDRDKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTM
VSKEVFEIVGMMDEELFIDYVDTEWCLRCLNYGILVHIIPDIEMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA
>Mature_296_residues
MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLGRNEGIAKAQNIGIRYSLEKG
AEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDRDKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTM
VSKEVFEIVGMMDEELFIDYVDTEWCLRCLNYGILVHIIPDIEMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR006446 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 33851; Mature: 33851

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLG
CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHCCCEEEEEEEEE
RNEGIAKAQNIGIRYSLEKGAEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDR
CCCCCCHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCEEECCEEEEC
DKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTMVSKEVFEIVGMMDEELFIDY
CCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEE
VDTEWCLRCLNYGILVHIIPDIEMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
ECHHHHHHHHCCCEEEEEECCHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEEE
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA
CCCCCEEHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLG
CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHCCCEEEEEEEEE
RNEGIAKAQNIGIRYSLEKGAEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDR
CCCCCCHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCEEECCEEEEC
DKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTMVSKEVFEIVGMMDEELFIDY
CCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEE
VDTEWCLRCLNYGILVHIIPDIEMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
ECHHHHHHHHCCCEEEEEECCHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEEE
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA
CCCCCEEHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]