Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is dinI [C]
Identifier: 30063278
GI number: 30063278
Start: 1886271
End: 1886519
Strand: Direct
Name: dinI [C]
Synonym: S1946
Alternate gene names: 30063278
Gene position: 1886271-1886519 (Clockwise)
Preceding gene: 30063277
Following gene: 30063279
Centisome position: 41.01
GC content: 44.18
Gene sequence:
>249_bases ATGCGTTTTGAAATCTGCATAGCCAAAGAGAAAATGACTAAAATGCCAACCGGTGCTGTGGATGCGTTAAAGGAAGAATT AACCCGACGCATCAGTAAACGTTATGACGATGTAGAGGTGATCGTAAAAGCCACCAGCAACGATGGCCTTTCTGTTACGC GCACCGCCGATAAAGATTCAGCTAAAACTTTTGTTCAGGAAACTCTGAAAGATACCTGGGAGTCTGCTGACGAGTGGTTT GTTCACTAA
Upstream 100 bases:
>100_bases CCATGCATGCCCCAAAAAATCACTTTCCCTCACTCTTGACACTGTTTATCCATACAGTTAAAAATAATACTGTATAAAAA CACAGTGTAGAGGGATTTTT
Downstream 100 bases:
>100_bases TTAGCACGTAAAATCAGTAACGGCTGGAAATCATTCAATACTCGCACTATCGGAAGTTCACCAGCCAGCCGCAGCACGTT CTTGCATACGACGTGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRFEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWF VH
Sequences:
>Translated_82_residues MRFEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWF VH >Mature_82_residues MRFEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWF VH
Specific function: Involved In Sos Regulation. Inhibits Reca By Preventing Reca To Bind Ssdna. Can Displace Ssdna From Reca. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dinI family [H]
Homologues:
Organism=Escherichia coli, GI1787300, Length=83, Percent_Identity=44.578313253012, Blast_Score=65, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010391 [H]
Pfam domain/function: PF06183 DinI [H]
EC number: NA
Molecular weight: Translated: 9413; Mature: 9413
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDS CCEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCEEEECCCCHH AKTFVQETLKDTWESADEWFVH HHHHHHHHHHHHHCCHHHCCCC >Mature Secondary Structure MRFEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDS CCEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCEEEECCCCHH AKTFVQETLKDTWESADEWFVH HHHHHHHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111050; 11206551; 11258796 [H]