Click here to switch to the map view.

The map label for this gene is ydhI

Identifier: 30063160

GI number: 30063160

Start: 1738717

End: 1738953

Strand: Direct

Name: ydhI

Synonym: S1802

Alternate gene names: 30063160

Gene position: 1738717-1738953 (Clockwise)

Preceding gene: 30063158

Following gene: 30063161

Centisome position: 37.8

GC content: 48.52

Gene sequence:

>237_bases
GTGAAGTTTATGCTCAATGCAACAGGATTGCCCTTACAAGATCTGGTGTTCGGTGCGTCCGTCTATTTTCCTCCGTTTTT
CAAAGCATTCGCGTTTGGATTCGTCATCTGGCTTGTCGTACACCGCCTGCTTCGTGGCTGGATCTACGCCGGCGATATCT
GGCATCCCTTGTTAATGGATTTATCGCTGTTTGCGATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAA

Upstream 100 bases:

>100_bases
CCGTCAGACATATTTTTCAGAAATTGCGCGTAAATTTTTCGCACTTAAAGAATATTTATTAATCTAACGCAATATATTCG
GTCGTAAAGGAATCTACTTT

Downstream 100 bases:

>100_bases
CTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGATAGTTGCGGTTCTTGCCGGATGGTGGCTGTGG
AATTATTACATGCAATCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW

Sequences:

>Translated_78_residues
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW
>Mature_78_residues
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787931, Length=78, Percent_Identity=100, Blast_Score=155, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDHI_ECO57 (P64472)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D85771
- PIR:   H90922
- RefSeq:   NP_288079.1
- RefSeq:   NP_310379.1
- ProteinModelPortal:   P64472
- EnsemblBacteria:   EBESCT00000024478
- EnsemblBacteria:   EBESCT00000059839
- GeneID:   912804
- GeneID:   961602
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2658
- KEGG:   ecs:ECs2352
- GeneTree:   EBGT00050000010551
- HOGENOM:   HBG473061
- OMA:   VYFPPLF
- ProtClustDB:   CLSK880152
- BioCyc:   ECOL83334:ECS2352-MONOMER
- InterPro:   IPR012451

Pfam domain/function: PF07869 DUF1656

EC number: NA

Molecular weight: Translated: 8891; Mature: 8891

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10f63ad0)-; HASH(0xfb700e4)-;

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMD
CCEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LSLFAICVCLALAILIAW
HHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMD
CCEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LSLFAICVCLALAILIAW
HHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796