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The map label for this gene is ybeR

Identifier: 30062166

GI number: 30062166

Start: 669334

End: 670041

Strand: Reverse

Name: ybeR

Synonym: S0658

Alternate gene names: 30062166

Gene position: 670041-669334 (Counterclockwise)

Preceding gene: 30062168

Following gene: 30062165

Centisome position: 14.57

GC content: 45.2

Gene sequence:

>708_bases
ATGGACATGGGGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCA
TTCATCCCCCAAAATGTATTTAGGTACATGCTTTTTTGACCTTTCTTCCTCATGGGGAATTGATGACCGTGATGACCTGC
TGCGCATAATTCACCGAATGATCGAGAACGGTCATGCCGCTCGGTTGGCAGGGTTTTATCACCGCTGGTTTCGTTATTCT
CCATGTGAATGGCGTGACTATCTTGCTGAATTAAATGAGCAAGGTCAGGCTTATGCGCAATTTGTCGCCAGCACAGCCGA
ATGCTGTGGTGAGGGAGGAATTAAAGCATGGGATTATGTCCGGATGGGTTTTTTAAGTCGAATGGGCGTACTTAATAACT
GGTTGAGTGAAGAAGAAAGTCTATGGATCCAGTCGCGTATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAA
TACTTTGCCGGTTATACCTTTGGTCGGCAATATTGGCAGTCTCCCGAAGATGATCATCTGCCTTTATTACGCGAATTCTT
AGCGCGTAAAGAATACGACGATTCCGGCAATGATATGTTTTATCAATTATTTGCCAGTGATGATGCGTATTACCCTACCT
TGTCCTGGCAACCACTGGCTGACTACCCCACATGCCCGGAAACGCTTAAGGATATGAGCGACTTATGA

Upstream 100 bases:

>100_bases
GCCTTATTTTATGCGTATTATGTTGCGTCAGAAAAGTATAAATAACTGAGCCTCGAAATGTAGTTTACATTCATTAAATG
AATGTTTAAGGATAAATTAT

Downstream 100 bases:

>100_bases
AAAATTGCTGGAAGATCCTCGATATAGAGGAAACGACTGACGTCGATATTATCCGCCGCGCTTATCTGGCGCTGTTACCG
TCCTTTCATCCAGAAACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRIIHRMIENGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL

Sequences:

>Translated_235_residues
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRIIHRMIENGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL
>Mature_235_residues
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRIIHRMIENGHAARLAGFYHRWFRYS
PCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeU [H]

Homologues:

Organism=Escherichia coli, GI1786865, Length=235, Percent_Identity=97.4468085106383, Blast_Score=477, Evalue=1e-136,
Organism=Escherichia coli, GI1786868, Length=235, Percent_Identity=57.4468085106383, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009677 [H]

Pfam domain/function: PF06889 DUF1266 [H]

EC number: NA

Molecular weight: Translated: 27682; Mature: 27682

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRIIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEHHEEEECCCCCCCCCHHHHHHHHHHH
IENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQYFAGYTFGRQYWQSPEDDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRIIHRM
CCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEHHEEEECCCCCCCCCHHHHHHHHHHH
IENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQYFAGYTFGRQYWQSPEDDHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]