Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is ybeL

Identifier: 30062168

GI number: 30062168

Start: 671252

End: 671734

Strand: Reverse

Name: ybeL

Synonym: S0660

Alternate gene names: 30062168

Gene position: 671734-671252 (Counterclockwise)

Preceding gene: 30062184

Following gene: 30062166

Centisome position: 14.6

GC content: 51.97

Gene sequence:

>483_bases
ATGAACAAGGTTGCTCAATATTACCGTGAACTGGTCGCGTCACTGAACGAACGCCTGCGCAATGGCGAACGTGATATCGA
CGCACTGGTGGAACAGGCGCGCGAGCGCGTAATAAAAACAGGGGAGTTAACGCGAACCGAGATCGATGAGCTGACGCGAG
CTGTCAGACGTGACCTGGAAGAGTTCGCCATGAGCTATGAAGAGAGCCTGAAAGAAGAATCTGACAGCGTCTTTATGCGG
GTGATTAAAGAAAGCTTGTGGCAGGAGCTGGCAGACATCACCGATAAAACGCAGCTTGAATGGCGCGAAATTTTCCAGGA
CCTCAATCATCATGGGGTTTATCACAGCGGAGAAGTGGTCGGGCTGGGAAATCTGGTCTGCGAGAAATGTCACTTCCATC
TCCCGATCTACACACCGGAAGTGCTGACGCTATGCCCGAAATGTGGTTATGACCAGTTCCAGAGACGCCCGTTTGAGCCG
TAA

Upstream 100 bases:

>100_bases
TATTCGTACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTA
ACGACCCGGGAGATGAAACG

Downstream 100 bases:

>100_bases
TAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCAGAATGAAATTCCCCGGCCCTTGTTTTTATTTCTACAGTAAAG
CTTCAGTCTCACGAATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLEEFAMSYEESLKEESDSVFMR
VIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP

Sequences:

>Translated_160_residues
MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLEEFAMSYEESLKEESDSVFMR
VIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP
>Mature_160_residues
MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLEEFAMSYEESLKEESDSVFMR
VIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=97.5, Blast_Score=327, Evalue=2e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009912 [H]

Pfam domain/function: PF07295 DUF1451 [H]

EC number: NA

Molecular weight: Translated: 18879; Mature: 18879

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLE
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEE
GLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP
CHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLE
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEE
GLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP
CHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]