| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is ybeL
Identifier: 30062168
GI number: 30062168
Start: 671252
End: 671734
Strand: Reverse
Name: ybeL
Synonym: S0660
Alternate gene names: 30062168
Gene position: 671734-671252 (Counterclockwise)
Preceding gene: 30062184
Following gene: 30062166
Centisome position: 14.6
GC content: 51.97
Gene sequence:
>483_bases ATGAACAAGGTTGCTCAATATTACCGTGAACTGGTCGCGTCACTGAACGAACGCCTGCGCAATGGCGAACGTGATATCGA CGCACTGGTGGAACAGGCGCGCGAGCGCGTAATAAAAACAGGGGAGTTAACGCGAACCGAGATCGATGAGCTGACGCGAG CTGTCAGACGTGACCTGGAAGAGTTCGCCATGAGCTATGAAGAGAGCCTGAAAGAAGAATCTGACAGCGTCTTTATGCGG GTGATTAAAGAAAGCTTGTGGCAGGAGCTGGCAGACATCACCGATAAAACGCAGCTTGAATGGCGCGAAATTTTCCAGGA CCTCAATCATCATGGGGTTTATCACAGCGGAGAAGTGGTCGGGCTGGGAAATCTGGTCTGCGAGAAATGTCACTTCCATC TCCCGATCTACACACCGGAAGTGCTGACGCTATGCCCGAAATGTGGTTATGACCAGTTCCAGAGACGCCCGTTTGAGCCG TAA
Upstream 100 bases:
>100_bases TATTCGTACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTA ACGACCCGGGAGATGAAACG
Downstream 100 bases:
>100_bases TAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCAGAATGAAATTCCCCGGCCCTTGTTTTTATTTCTACAGTAAAG CTTCAGTCTCACGAATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLEEFAMSYEESLKEESDSVFMR VIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP
Sequences:
>Translated_160_residues MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLEEFAMSYEESLKEESDSVFMR VIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP >Mature_160_residues MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLEEFAMSYEESLKEESDSVFMR VIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=97.5, Blast_Score=327, Evalue=2e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 18879; Mature: 18879
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLE CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEE GLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP CHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCC >Mature Secondary Structure MNKVAQYYRELVASLNERLRNGERDIDALVEQARERVIKTGELTRTEIDELTRAVRRDLE CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREIFQDLNHHGVYHSGEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEE GLGNLVCEKCHFHLPIYTPEVLTLCPKCGYDQFQRRPFEP CHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]