Definition | Shigella flexneri 2a str. 2457T, complete genome. |
---|---|
Accession | NC_004741 |
Length | 4,599,354 |
Click here to switch to the map view.
The map label for this gene is fepB
Identifier: 30062050
GI number: 30062050
Start: 522892
End: 523848
Strand: Reverse
Name: fepB
Synonym: S0512
Alternate gene names: 30062050
Gene position: 523848-522892 (Counterclockwise)
Preceding gene: 30062056
Following gene: 30062048
Centisome position: 11.39
GC content: 56.01
Gene sequence:
>957_bases GTGAGACTCGCCCCGCTCTACCGCAACGCCCTTCTATTAACAGGACTTTTGCTTTCAGGAATAGCCGTAGTTCAGGCCGC CGACTGGCCGCGTCAGATTACTGACAGCCGGGGCACTCATACCCTGGAAAGCCAGCCGCAGCGTATTGTTTCCACCAGCG TCACCCTGACCGGATCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGCGGCGCGACCACGCCGAATAACCGCGTCGCA GATGACCAGGGCTTTTTACGCCAGTGGAGCAAGGTGGCGAAAGAACGCAAACTGCAACGGCTCTATATCGGCGAACCGAG CGCCGAAGCCGTTGCCGCGCAAATGCCGGATCTGATTTTAATTAGCGCAACCGGCGGGGATTCGGCGCTGGCGCTGTATG ATCAGCTTTCCACCATCGCCCCGACATTAATCATCAATTACGACGACAAAAGCTGGCAGTCGCTGTTAACGCAGCTTGGC GAAATTACCGGGCATGAGAAACAAGCGGCAGAGCGGATTGCACAGTTTGATAAGCAACTGGCAGCGGCGAAAGAGCAAAT CAAATTACCGCCGCAGCCGGTCACTGCCATTGTCTATACCGCCGCTGCACACAGTGCCAATCTCTGGACGCCGGAATCAG CACAAGGGCAGATGCTGGAACAACTCGGCTTTACGCTGGCGAAATTGCCCGCAGGGTTAAACGCCAGCCAAAGCCAGGGC AAACGCCATGACATCATTCAGCTTGGTGGGGAAAATCTGGCTGCGGGGTTAAACGGTGAATCGCTATTCCTGTTCGCTGG TGATCAGAAAGATGCCGATGCGATTTATGCCAATCCACTGCTCGCGCACCTGCCTGCGGTACAAAACAAGCAGGTTTATG CGCTGGGAACCGAGACGTTCCGCCTGGATTACTACAGCGCCATGCAAGTGCTGGAACGGCTTAAGGCGCTGTTTTAA
Upstream 100 bases:
>100_bases TCCTGCGCCGTTTTGCCCCCTCTCCCCAAAGGGACGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTAT TAATAACAGGAAGCTGACTT
Downstream 100 bases:
>100_bases GCATTAACTGTCGGACGCTGTCACCTGCGGCGGCGTCTGGCGAAAACGTCGCAACTCCACCAGCACCAGCAATAACAACA CGCCGATAATCAACAAACCA
Product: iron-enterobactin transporter periplasmic binding protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRLAPLYRNALLLTGLLLSGIAVVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVA DDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF
Sequences:
>Translated_318_residues MRLAPLYRNALLLTGLLLSGIAVVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVA DDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF >Mature_318_residues MRLAPLYRNALLLTGLLLSGIAVVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVA DDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF
Specific function: Binds ferrienterobactin; part of the binding-protein- dependent transport system for uptake of ferrienterobactin [H]
COG id: COG4592
COG function: function code P; ABC-type Fe2+-enterobactin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786807, Length=318, Percent_Identity=99.3710691823899, Blast_Score=637, Evalue=0.0, Organism=Escherichia coli, GI87082411, Length=294, Percent_Identity=24.4897959183673, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 34326; Mature: 34326
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAPLYRNALLLTGLLLSGIAVVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCHHHHHHHEEEECCE LAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLIL EEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEE ISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQL EEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG HHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCHHCC KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETF CCCCCEEECCCCEEECCCCCEEEEEECCCCCCCHHHHCHHHHHCCCCCCCEEEEECCCEE RLDYYSAMQVLERLKALF EHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLAPLYRNALLLTGLLLSGIAVVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCHHHHHHHEEEECCE LAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLIL EEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEE ISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQL EEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG HHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCHHCC KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETF CCCCCEEECCCCEEECCCCCEEEEEECCCCCCCHHHHCHHHHHCCCCCCCEEEEECCCEE RLDYYSAMQVLERLKALF EHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]