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The map label for this gene is envY

Identifier: 30062018

GI number: 30062018

Start: 479858

End: 480619

Strand: Reverse

Name: envY

Synonym: S0475

Alternate gene names: 30062018

Gene position: 480619-479858 (Counterclockwise)

Preceding gene: 30062019

Following gene: 30062017

Centisome position: 10.45

GC content: 45.41

Gene sequence:

>762_bases
ATGCAATTGAGCAGCAGTGAACCTTGCGTGGTGATCCTGACCGAAAAAGAGGTAGAGGTAAGCGTCAATAACCATGCTAC
GTTTACCCTTCCGAAAAACTACCTGGCCGCCTTCGCGTGCAACAATAACGTCATTGAACTCTCAACGTTAAATCACGTAT
TAATCACCCACATCAACCGTAACATCATCAACGATTATCTGTTGTTTTTAAATAAGAAATTAACCTGTGTAAAGCCCTGG
TCGCGGCTAGCAACCCCGGTTATCGCTTGTCATAGCCGTACACCGGAAGTGTTCCGGCTAGCCACCAACCACAGCAAGCA
GCAATCCAGCAAACCCTGCGAAGCGGAGTTGACGCGCGCATTACTTTTTACCGTATTGTCTAACTTTCTTGAGCAATCGC
GGTTTATTGCCCTACTGATGTATATCTTACGCAGCAGCGTCCGCGACAGCGTCTGCCGCATTATTCAAAGCGATATTCAG
CATTACTGGAATCTGCGAATTGTCGCCAGTTCGCTATGTTTAAGCCCCAGCCTGCTCAAAAAGAAATTAAAAAACGAAAA
TACCAGCTATAGCCAGATTGTCACAGAGTGTCGTATGCGTTACGCCGTACAGATGTTATTGATGGATAACAAAAATATCA
CTCAGGTGGCGCAATTATGTGGCTATAGCAGCACGTCGTACTTTATCTCTGTTTTTAAGGCGTTTTACAGCCTGACACCG
TTGAATTATCTCGCCAAACAGCGACAAAAAGTGATGTGGTGA

Upstream 100 bases:

>100_bases
CATGCTAAAGAAAGAAGATCGTTATCGGCGAACGGGCCGATCACTCATGCAGGAAGCATAGATCCTTTGAGCGGAGTTTC
TGATATCTGAGGAGTGCGAA

Downstream 100 bases:

>100_bases
AGGGCAAAGCGGAAACGGATAAGACGGGCATAAATGAAGAAGAAATGGCGCGCCCTGCAGGATTCGAACCTGCGGCCCAC
GACTTAGAAGGTCGTTGCTC

Product: envelope protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINRNIINDYLLFLNKKLTCVKPW
SRLATPVIACHSRTPEVFRLATNHSKQQSSKPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQ
HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYSLTP
LNYLAKQRQKVMW

Sequences:

>Translated_253_residues
MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINRNIINDYLLFLNKKLTCVKPW
SRLATPVIACHSRTPEVFRLATNHSKQQSSKPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQ
HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYSLTP
LNYLAKQRQKVMW
>Mature_253_residues
MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINRNIINDYLLFLNKKLTCVKPW
SRLATPVIACHSRTPEVFRLATNHSKQQSSKPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQ
HYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYSLTP
LNYLAKQRQKVMW

Specific function: Influences the temperature-dependent expression of several E.coli envelope proteins, most notably the porins ompF and ompC and the lambda receptor, lamB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786778, Length=253, Percent_Identity=98.0237154150198, Blast_Score=508, Evalue=1e-145,
Organism=Escherichia coli, GI1790557, Length=252, Percent_Identity=55.952380952381, Blast_Score=298, Evalue=2e-82,
Organism=Escherichia coli, GI1789933, Length=194, Percent_Identity=38.1443298969072, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1786776, Length=96, Percent_Identity=42.7083333333333, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789932, Length=124, Percent_Identity=40.3225806451613, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1787776, Length=120, Percent_Identity=39.1666666666667, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 29055; Mature: 29055

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINR
CCCCCCCCEEEEEECCCEEEEECCCEEEEECHHHHEEEEECCCEEEEEHHHHHHHHHHHH
NIINDYLLFLNKKLTCVKPWSRLATPVIACHSRTPEVFRLATNHSKQQSSKPCEAELTRA
HHHHHHHHHHCCCCCEECCHHHHCCHHHHHCCCCHHHHHHHHCCCHHHCCCCHHHHHHHH
LLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPSLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYSLTP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCH
LNYLAKQRQKVMW
HHHHHHHHHHCCC
>Mature Secondary Structure
MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINR
CCCCCCCCEEEEEECCCEEEEECCCEEEEECHHHHEEEEECCCEEEEEHHHHHHHHHHHH
NIINDYLLFLNKKLTCVKPWSRLATPVIACHSRTPEVFRLATNHSKQQSSKPCEAELTRA
HHHHHHHHHHCCCCCEECCHHHHCCHHHHHCCCCHHHHHHHHCCCHHHCCCCHHHHHHHH
LLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPSLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYSLTP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCH
LNYLAKQRQKVMW
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2536924; 8905232; 9278503 [H]