Click here to switch to the map view.

The map label for this gene is ybcH

Identifier: 30062019

GI number: 30062019

Start: 480802

End: 481692

Strand: Reverse

Name: ybcH

Synonym: S0476

Alternate gene names: 30062019

Gene position: 481692-480802 (Counterclockwise)

Preceding gene: 30062020

Following gene: 30062018

Centisome position: 10.47

GC content: 51.74

Gene sequence:

>891_bases
ATGCGTAAGTTCATTTTCGTATTGCTGACACTGCTTTTGGTCAGCCCTTTTTCCTTTGCGATGAAAGGTATTATCTGGCA
ACCACAAAACCGAGATAGTCAGGTTACCGATACCCAGTGGCAGGGGCTGATGAGTCAGTTACGTTTTCAAGGCTTCGATA
CCCTGGTTTTGCAATGGACCCGTTACGGCGATGCATTTACCCAGCCAGAACAGCGCACGTTATTGTTTAAGCGTGCCGCA
GCTGCGCAACAGACTGGCCTGAAGCTGATTGTCGGGCTGAACGCCGATCCGGAATTTTTTATGCACCAGAAACAGTCGTC
TGCAGCGCTGGAAAGCTATCTTAATCGCCTGCTGGCTGCCGATCTCCAGCAAGCCAGATTATGGAGCGCCGCGCCTGGCA
TAACGCCGGATGGCTGGTACATCAGCGCGGAAATTGACGACCTGAACTGGCGCAGCGAAGCCGCCCGTCAACCTTTGCTA
ACATGGTTAAACAACGCGCAGCGGCTGATTAGCGATGTTTCAGCAAAACCGGTTTATATCAGTAGTTTTTTCGCCGGAAA
CATGTCGCCCGATGGCTATCGCCAACTGCTGGAACAAGTTAAAGCAACCGGAGTTAATGTCTGGGTACAGGATGGCAGCG
GCGTGGATAAACTTACCGCTGAACAGCGTGAACGTTATCTACAGGCCAGCGCCGATTGCCAAAGCTCCGCCCCAGCAAGC
GGCATTGTTTATGAACTGTTTGTCGCCGGCAAAGGCAAAACCTTTACAGCGAAACCGAAACCGGACGCAGAAATTGCCTC
GCTGTTAGCGAAACGTTCCTCTTGCGGTAAAGACATGCTCTATTTCTCTCTGCGCTATTTGCCCGTCGCGCACGGCATTC
TCGAGTATTAA

Upstream 100 bases:

>100_bases
AGTCAGTCTCGGCGTCGAGTATCAACATACCTTTAAGGCGATTAATCAACGTAACGGAGAGCGCAACAACGCGTTTCTCA
CCATTGGAGTGCACTGGTAA

Downstream 100 bases:

>100_bases
ATCCCCTCCAGGTAAGTCGGGTACGACCTGGCTTACCTCTTTCGCTCTCGTCAGAATTCCATCAAGATTAATTGCTAAAA
AGCATGCTAAAGAAAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRFQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAA
AAQQTGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLL
TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS
GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDMLYFSLRYLPVAHGILEY

Sequences:

>Translated_296_residues
MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRFQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAA
AAQQTGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLL
TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS
GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDMLYFSLRYLPVAHGILEY
>Mature_296_residues
MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRFQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAA
AAQQTGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLL
TWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS
GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDMLYFSLRYLPVAHGILEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786779, Length=296, Percent_Identity=97.972972972973, Blast_Score=596, Evalue=1e-172,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33146; Mature: 33146

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRFQGFDTLVLQWT
CHHHHHHHHHHHHHCHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RYGDAFTQPEQRTLLFKRAAAAQQTGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAA
HCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
DLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYI
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS
EEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDMLYFSLRYLPVAHGILEY
CEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRFQGFDTLVLQWT
CHHHHHHHHHHHHHCHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RYGDAFTQPEQRTLLFKRAAAAQQTGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAA
HCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
DLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYI
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS
EEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDMLYFSLRYLPVAHGILEY
CEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226649; 8905232; 9278503 [H]