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The map label for this gene is ylaB

Identifier: 30061958

GI number: 30061958

Start: 413399

End: 414949

Strand: Reverse

Name: ylaB

Synonym: S0409

Alternate gene names: 30061958

Gene position: 414949-413399 (Counterclockwise)

Preceding gene: 30061959

Following gene: 30061956

Centisome position: 9.02

GC content: 47.71

Gene sequence:

>1551_bases
GTGAGAACACGACATCTGGTCGGCCTTATTTCGGGAGTACTGATTCTTTCAGTATTGCTGCCTGTCGGCTTAAGCATCTG
GCTGGCCCATCAGCAGGTAGAAACATCGTTTATTGAAGAGCTGGATACCTATTCCTCCCGCGTCGCTATTCGAGCCAATA
AGGTGGCGACACAAGGGAAAGATGCGCTGCAGGAGCTGGAAAGATGGCAAGGCGCTGCCTGTAGCGAAGCCCATCTCATG
GAAATGCGTCGGGTATCTTACAGTTATCGCTATATTCAGGAAGTGGTTTATATCGATAACAACGTTCCCCAGTGTTCGTC
TCTGGAGCATGAAAGTCCGCCCGATACCTTTCCCGAGCTAGGTAAAATTTCGAAAGATGGTTATCGTGTCTGGTTAACAT
CGCATAACGATTTAGGCATTATCCGTTACATGGTCGCCATGGGAACGGCACATTATGTCGTCATGATCGACCCCGCTTCC
TTTATTGATGTCATTCCCTATAGTTCATGGCAAATTGATGCCGCCATTATTGGCAATGCCCATAACGTTGTCATAACCAG
CAGCGATGAAATTGCTCAGGGAATTATTACCAGGCTACAAAAAACACCCGGTGAGCATATCGAAAATAATGGGATCATTT
ACGATATACTGCCCTTCCTGGAGATGAATATTTCGATCATCACCTGGGCTTCAACGAAAATGTTGCAGAAAGGCTGGCAT
CGGCAAGTCTTTATTTGGTTACCGCTCGGGTTGGTGATTGGCCTGCTGGCAGCGATGTTTGTGCTGCGTATTTTGCGCCG
TATCCAATCACCGCATCATCGGCTGCAGGATGCTATCGAAAATCGTGATATTTGCGTGCACTATCAGCCGATTGTCTCCT
TAGCCAATGGCAAAATTGTCGGTGCTGAGGCACTGGCGCGCTGGCCGCAGACAGACGGTAGTTGGTTGTCACCAGATAGT
TTTATTCCGCTGGCACAGCAAACGGGCCTTTCTGAGCCATTGACGCTACTGATTATAAGAAGCGTCTTTGAAGATATGGG
CGACTGCTTGCGTCAGCATCCACAGCAGCATATTTCGATCAATCTTGAATCCACCGTGCTCACCTCGGAAAAAATCCCGC
AATTGCTGCGTGAAATGATCAATCACTATCAGGTTAATCCCAGACAGATCGCGCTTGAACTCACTGAACGCGAGTTTGCC
GATCCGAAAACCAGCGCCCCGATAATTTCTCGCTACCGGGAGGCGGGCCATGAAATTTATCTTGATGATTTTGGTACGGG
GTATTCAAGTTTAAGTTATTTACAGGATCTGGATGTCGACATTCTGAAGATCGATAAATCTTTCGTTGATGCGCTGGAAT
ATAAAAATGTCACGCCGCATATCATCGAAATGGCAAAAACACTGAAACTGAAAATGGTAGCGGAGGGAATCGAAACCAGT
AAACAAGAAGAGTGGCTACGCCAGCATGGCGTGCACTACGGTCAGGGCTGGCTCTACAGCAAGGCATTACCGAAAGAAGA
TTTCTTACGCTGGGCCGAGCAACATTTGTGA

Upstream 100 bases:

>100_bases
CATCACTTCATGAAATACCAGCTCTACCTCCTTATCTCCTGCCAGCCTTTTTCCACAATCAGATATACTTTCCCTACACT
GTGTTAATAAGGATATGCTG

Downstream 100 bases:

>100_bases
ATTTTTGGGCTGACGGCACGCCGCACAGCCCGTCACGCTACCTATTCGTCGATGATTGACTCGAATCCGCCATAGATCAT
TCGCTTGCCGTCAAACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLM
EMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPELGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS
FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFLEMNISIITWASTKMLQKGWH
RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS
FIPLAQQTGLSEPLTLLIIRSVFEDMGDCLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFA
DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS
KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL

Sequences:

>Translated_516_residues
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLM
EMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPELGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS
FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFLEMNISIITWASTKMLQKGWH
RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS
FIPLAQQTGLSEPLTLLIIRSVFEDMGDCLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFA
DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS
KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
>Mature_516_residues
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLM
EMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPELGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPAS
FIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFLEMNISIITWASTKMLQKGWH
RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDS
FIPLAQQTGLSEPLTLLIIRSVFEDMGDCLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFA
DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS
KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL

Specific function: Unknown

COG id: COG4943

COG function: function code T; Predicted signal transduction protein containing sensor and EAL domains

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=516, Percent_Identity=98.6434108527132, Blast_Score=1043, Evalue=0.0,
Organism=Escherichia coli, GI1790496, Length=522, Percent_Identity=33.5249042145594, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI87081845, Length=293, Percent_Identity=34.4709897610922, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1788502, Length=270, Percent_Identity=31.4814814814815, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI226510982, Length=237, Percent_Identity=35.4430379746835, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI1787541, Length=247, Percent_Identity=29.9595141700405, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI87081980, Length=236, Percent_Identity=36.4406779661017, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1786507, Length=245, Percent_Identity=33.0612244897959, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1788849, Length=263, Percent_Identity=30.4182509505703, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI87081921, Length=245, Percent_Identity=33.0612244897959, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87082096, Length=244, Percent_Identity=30.327868852459, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1787055, Length=240, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 58750; Mature: 58750

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHCCH
DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEEEEEECCC
HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFLEMNISIITWASTKMLQKGWH
CEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCEEEEEECHHHHHHCCCC
RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV
CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCEE
GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDCLRQHPQQHISI
CHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEE
NLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCCCCCCCHHHHHHHHCCCEEE
LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS
EECCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
HHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHCCH
DALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
GKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNA
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEEEEEECCC
HNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFLEMNISIITWASTKMLQKGWH
CEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCEEEEEECHHHHHHCCCC
RQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIV
CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCEE
GAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDCLRQHPQQHISI
CHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEE
NLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIY
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCCCCCCCHHHHHHHHCCCEEE
LDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS
EECCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
HHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]