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The map label for this gene is ybaZ

Identifier: 30061956

GI number: 30061956

Start: 412314

End: 412625

Strand: Reverse

Name: ybaZ

Synonym: S0406

Alternate gene names: 30061956

Gene position: 412625-412314 (Counterclockwise)

Preceding gene: 30061958

Following gene: 30061953

Centisome position: 8.97

GC content: 56.73

Gene sequence:

>312_bases
ATGGAAAAAGAAGATTCATTTCCCCAACGCGTCTGGCAAATCGTCGCCGCTATTCCCGAAGGCTATGTCACCACTTACGG
TGATGTGGCGAAACTGGCGGGATCGCCCCGCGCCGCGCGCCAGGTGGGCGGTGTGTTAAAGCGTCTCCCTGAAGGCAGCA
CCTTACCCTGGCACCGGGTGGTTAATCGCCATGGCACAATTTCGCTAACCGGGCCGGATTTACAGCGTCAGCGACAGGCA
TTACTGGCAGAAGGTGTGATGGTATCGGGAAGCGGGCAAATCGACTTGCAGCGTTATCGCTGGAACTACTAA

Upstream 100 bases:

>100_bases
ATTGCAACCCATTGCGTGCCAGATGCTGGTTTCTTGCGCAATGCGACTTCACTCGGGCGTTTTTCCAGATTATGCTGAAA
AATTACCTCAGGAAGAAAAG

Downstream 100 bases:

>100_bases
CCCTCTCCGGGCGGAGTAATGCCAGTCAGTTAAGCAACTGACTGGCTCTTTTTCGGGGCTGTGGGGTATTTCCAGGGCCT
CTCCTTTACCACTCTCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQA
LLAEGVMVSGSGQIDLQRYRWNY

Sequences:

>Translated_103_residues
MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQA
LLAEGVMVSGSGQIDLQRYRWNY
>Mature_103_residues
MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQA
LLAEGVMVSGSGQIDLQRYRWNY

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family

Homologues:

Organism=Escherichia coli, GI1786659, Length=103, Percent_Identity=100, Blast_Score=212, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBAZ_ECOLI (P0AFP2)

Other databases:

- EMBL:   U82664
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   F64775
- RefSeq:   AP_001104.1
- RefSeq:   NP_414988.1
- ProteinModelPortal:   P0AFP2
- SMR:   P0AFP2
- DIP:   DIP-48135N
- MINT:   MINT-1239891
- STRING:   P0AFP2
- EnsemblBacteria:   EBESCT00000001257
- EnsemblBacteria:   EBESCT00000015888
- GeneID:   945094
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0444
- KEGG:   eco:b0454
- EchoBASE:   EB3043
- EcoGene:   EG13254
- eggNOG:   COG3695
- GeneTree:   EBGT00050000009234
- HOGENOM:   HBG752398
- OMA:   LATYGQI
- ProtClustDB:   CLSK879673
- BioCyc:   EcoCyc:G6251-MONOMER
- Genevestigator:   P0AFP2
- InterPro:   IPR014048
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PANTHER:   PTHR10815
- TIGRFAMs:   TIGR00589

Pfam domain/function: PF01035 DNA_binding_1; SSF46767 MethylDNA_cys_mtrans_DNA_bd

EC number: NA

Molecular weight: Translated: 11488; Mature: 11488

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRV
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH
VNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY
HCCCCEEEECCCCHHHHHHHHHHCCEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRV
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH
VNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY
HCCCCEEEECCCCHHHHHHHHHHCCEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503