| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30061925
Identifier: 30061925
GI number: 30061925
Start: 378572
End: 378811
Strand: Reverse
Name: 30061925
Synonym: S4812
Alternate gene names: NA
Gene position: 378811-378572 (Counterclockwise)
Preceding gene: 30061926
Following gene: 30061922
Centisome position: 8.24
GC content: 44.58
Gene sequence:
>240_bases ATGTTGGGGGGAGCGCGGAAGTATCAAAAGCGGGGCTTTGGTCAGGACCTATTATGTGATTTTTTTGAACATGTAAAAAA AATTCACCCGGCATTACCAATTAAAGGGGTTTATCTTGATGCTGACCCTGCCGCCATTAACTTTTATGCTCGTCTCGGCT TTGTTCAGCTTTCAGCGACACCAAATGCTTTTGGTGCTGTACCTATGTTTTTGGCGATTCAGCATATTCTCGCGGCTTAG
Upstream 100 bases:
>100_bases TGGCATCTGTACTTTTACGGCATATTCGCTGGAAAGACAACGCGTTTCTGGCGTCCTTCAGGGTTCACAACCTTCAGAAA TTGGTGTTGTCAGATTAGTC
Downstream 100 bases:
>100_bases ATTATTATCGCCACCCGCCAGGGCAAGTTTTGGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCC GATGACCTTGTCATGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MLGGARKYQKRGFGQDLLCDFFEHVKKIHPALPIKGVYLDADPAAINFYARLGFVQLSATPNAFGAVPMFLAIQHILAA
Sequences:
>Translated_79_residues MLGGARKYQKRGFGQDLLCDFFEHVKKIHPALPIKGVYLDADPAAINFYARLGFVQLSATPNAFGAVPMFLAIQHILAA >Mature_79_residues MLGGARKYQKRGFGQDLLCDFFEHVKKIHPALPIKGVYLDADPAAINFYARLGFVQLSATPNAFGAVPMFLAIQHILAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8661; Mature: 8661
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGGARKYQKRGFGQDLLCDFFEHVKKIHPALPIKGVYLDADPAAINFYARLGFVQLSAT CCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCEEEECCC PNAFGAVPMFLAIQHILAA CCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLGGARKYQKRGFGQDLLCDFFEHVKKIHPALPIKGVYLDADPAAINFYARLGFVQLSAT CCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCEEEECCC PNAFGAVPMFLAIQHILAA CCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA