| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30061926
Identifier: 30061926
GI number: 30061926
Start: 379105
End: 379416
Strand: Reverse
Name: 30061926
Synonym: S0373
Alternate gene names: NA
Gene position: 379416-379105 (Counterclockwise)
Preceding gene: 30061927
Following gene: 30061925
Centisome position: 8.25
GC content: 49.36
Gene sequence:
>312_bases ATGCCTGGAAAAACAGCCGCTCTATACGATGTCGATAAAACGCTGAAAAATGCGCGGGTCGAACTCAAAACTAGTCCCGA CGCCAAAAACAAACTTCGTGAAGCTGCGCAAGCCGTTGGGGTAGATTTAAGCGCTTTTATTTTGAGCGCTGCTATGGAAC GCGCCGAAAGTGTGCTTGATAACCAACGTCGCCGTGAGCTTTCGAATCAAAGCTGGGAACTGATGAACCAACTCATCGCT GAACCTGCTCAACCGACGCTCGCCCTCAAGGCGTTAATGAAAAGGAAAAACAGCGATGGTCGACAAGCATGA
Upstream 100 bases:
>100_bases AGAGTGAGCAGATGCACATAAATTAATCATACGGTTGATAGCCGTATTATGTATGAGATCGACTCCCTACGATTTCATTC AGTTAATCAAAGAAGTCATA
Downstream 100 bases:
>100_bases AGAGATTACTCTGCCCATAGTCCTCTCCTGTAATTATCAGTCTGATATTACTTATCCTGGGCAAAAACAGTTTGATTGCG GTAACCCTGTTATCGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MPGKTAALYDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLDNQRRRELSNQSWELMNQLIA EPAQPTLALKALMKRKNSDGRQA
Sequences:
>Translated_103_residues MPGKTAALYDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLDNQRRRELSNQSWELMNQLIA EPAQPTLALKALMKRKNSDGRQA >Mature_102_residues PGKTAALYDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLDNQRRRELSNQSWELMNQLIAE PAQPTLALKALMKRKNSDGRQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11394; Mature: 11263
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGKTAALYDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLD CCCCCHHHHHHHHHHHHHHECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NQRRRELSNQSWELMNQLIAEPAQPTLALKALMKRKNSDGRQA HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGKTAALYDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLD CCCCHHHHHHHHHHHHHHECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NQRRRELSNQSWELMNQLIAEPAQPTLALKALMKRKNSDGRQA HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA