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The map label for this gene is csiD [H]

Identifier: 161486450

GI number: 161486450

Start: 2756225

End: 2757157

Strand: Direct

Name: csiD [H]

Synonym: S2871

Alternate gene names: 161486450

Gene position: 2756225-2757157 (Clockwise)

Preceding gene: 30064025

Following gene: 30064027

Centisome position: 59.93

GC content: 53.27

Gene sequence:

>933_bases
ATGAATGCACTGACCGCCGTACAAAATAACGCTGTCGATTCAGGCCAGGACTATAGCGGATTCACTCTCATCCCGTCGGC
GCAATCCCCGCGTCTGCTGGAACTCACCTTCACCGAACAGACGACCAAACAGTTTCTCGAACAGGTTGCCGAATGGCCCG
TGCAGGCGCTGGAGTACAAATCGTTTCTGCGTTTTCGGGTAGGCAAAATTCTTGACGATCTGTGTGCGAATCAGCTGCAA
CCATTGCTGTTGAAGACCCTGCTAAACCGTGCTGAAGGTGCGCTGTTGATCAATGCGGTAGGTATCGATGATGTGGCGCA
GGCAGATGAGATGGTGAAGCTGGCAACGGCGGTAGCGCATCTGATTGGTCGCTCAAATTTCGATGCGATGAGCGGTCAGT
ATTACGCGCGTTTCGTGGTGAAAAATGTCGATAACTCAGACAGCTATCTGCGTCAGCCGCACCGCGTGATGGAACTGCAC
AACGACGGCACGTATGTCGAAGAGATCACCGATTACGTGCTGATGATGAAAATCGATGACTGGGAACATCTGGACCACTA
TTTCCGCCATCCACTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGCAAAAACGTCAGCAAAGATGTTTTCCATC
CAGTGTTCGACGTTGATCAACAGGGTCGCCCGGTGATGCGCTATATCGACCAGTTCGTCCAGCCAAAAGATTTTGAAGAA
GGCGTGTGGTTGAGCGAGCTTTCCGATGCCATTGAAACCAGCAAAGGCATTCTTTCTGTACCCGTTCCCGTTGGCAAATT
CCTGTTGATAAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGC
GTCAGCGTGGCTATTTCGCTTACGCCACTCACCACTACCAGACGCATCAGTAA

Upstream 100 bases:

>100_bases
GCTTTTGTGCGCATTTTTCAGAAATGTAGATATTTTTAGATTATGGCTACGAAATGAGCATCGCCATGTCACCCTACATC
TCATAAGAGGATCGCTTCTG

Downstream 100 bases:

>100_bases
GCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGA
TTGATGTTTATCCGGATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNALTAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQ
PLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
NDGTYVEEITDYVLMMKIDDWEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEE
GVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ

Sequences:

>Translated_310_residues
MNALTAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQ
PLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
NDGTYVEEITDYVLMMKIDDWEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEE
GVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ
>Mature_310_residues
MNALTAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQ
PLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
NDGTYVEEITDYVLMMKIDDWEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEE
GVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ

Specific function: May be involved in the control of utilization of gamma- aminobutyric acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsiD family [H]

Homologues:

Organism=Escherichia coli, GI87082147, Length=325, Percent_Identity=93.2307692307692, Blast_Score=602, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015038 [H]

Pfam domain/function: PF08943 CsiD [H]

EC number: NA

Molecular weight: Translated: 35725; Mature: 35725

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALTAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYK
CCCCHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
SFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
LIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDD
HHCCCCCCHHCCHHHHHHHHHCCCCCHHHHHCHHHHHHHCCCCCHHHHHHCEEEEEEECC
WEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEE
HHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
GVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFA
CCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCEE
YATHHYQTHQ
EEECCCCCCC
>Mature Secondary Structure
MNALTAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYK
CCCCHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
SFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
LIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDD
HHCCCCCCHHCCHHHHHHHHHCCCCCHHHHHCHHHHHHHCCCCCHHHHHHCEEEEEEECC
WEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEE
HHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCC
GVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFA
CCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCEE
YATHHYQTHQ
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA