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The map label for this gene is ygaQ [H]

Identifier: 30064025

GI number: 30064025

Start: 2755617

End: 2755889

Strand: Direct

Name: ygaQ [H]

Synonym: S2870

Alternate gene names: 30064025

Gene position: 2755617-2755889 (Clockwise)

Preceding gene: 30064023

Following gene: 161486450

Centisome position: 59.91

GC content: 35.9

Gene sequence:

>273_bases
GTGAACATTAATCACTCTCCTCATGATGGACTAGTTATAATAAATAAAGGAAACGAAGAAGTTGAAGGTACCTGGCCTAA
CAAATTGCAACCTGGAATATATAAAAACATGGGGAGTAATAGCGTTAACATTATTATTAATAATACCCGAAAAATTATCC
CCCCTTGTAAAGTATTTACGCTTAGAGGCGGATCTCTAAATATCAATATTCCTAGGCGTAGCGCTCTTCTTTTAGGGAAA
ACAGGAGAACCGCCGAACTATCTCTATTTATAA

Upstream 100 bases:

>100_bases
TGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATTTGCAACTAAAAACGTTCTGG
CCTTTAGTCGTGGGGATTCT

Downstream 100 bases:

>100_bases
TTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTAACGGTCATTTTGTAGTGAAGCCATT
TACTGTTTTTTATCGACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPCKVFTLRGGSLNINIPRRSALLLGK
TGEPPNYLYL

Sequences:

>Translated_90_residues
MNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPCKVFTLRGGSLNINIPRRSALLLGK
TGEPPNYLYL
>Mature_90_residues
MNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPCKVFTLRGGSLNINIPRRSALLLGK
TGEPPNYLYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C [H]

EC number: NA

Molecular weight: Translated: 9979; Mature: 9979

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPCKVFT
CCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEE
LRGGSLNINIPRRSALLLGKTGEPPNYLYL
EECCEEEEEECCCEEEEEECCCCCCCEEEC
>Mature Secondary Structure
MNINHSPHDGLVIINKGNEEVEGTWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPCKVFT
CCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEE
LRGGSLNINIPRRSALLLGKTGEPPNYLYL
EECCEEEEEECCCEEEEEECCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]