| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349695
Identifier: 29349695
GI number: 29349695
Start: 5646266
End: 5646934
Strand: Reverse
Name: 29349695
Synonym: BT_4287
Alternate gene names: NA
Gene position: 5646934-5646266 (Counterclockwise)
Preceding gene: 29349698
Following gene: 29349694
Centisome position: 90.2
GC content: 36.77
Gene sequence:
>669_bases ATGAAGCAAAAATTAACAAGAGCACTCATTGATGAGATTCGGAAAGAGATGCCAGTACTGACAGAAATGGAAATGAGATG TTGCAACGGTGGAGATGGTGGAACTACAAGTTGGGATTGTTTATTCAATTGCATGCACCATATGGATCCCTCCCGATCTG CGCAAGATTATGCTAATGATTATAAAGATATTTATGGTCTTGATCCTACAGCAATGGGAGGAGTTCCCAATGAATTAATT GGAAATGTCCTTAGCGTTATGGGATTTGGTAATACAGTTCCAGGTTCAATGACTTCTAACAGAGACTATTATCAAGTTGC AACTATGGTAAATCCTGATGGCACAGGACATACTATTATAGTCTTTGCAGTACCAGATGAAAACGGAAAAATCTCTTATT TTGACCCAACCCTAGAGGGGGAAGATGGGAAAAAGGTAAGAAAAGTAGACATTTCGGATATATCCACAATATATCGAATA AAAAAAGCCGACATTGATACTACCATTGGTGCTCATGAGGAAAGCTACGGCTATGCCTATGGTTATTTTGGTTATGGTAA TTACGAAGATAGTTATGGCTATGGTAATAGTTATTACGGGAATTATAATTATGAAAATATTAGTGACTACAATGGTACTG CTAACAGTGATTACAGTTACTATAATTAA
Upstream 100 bases:
>100_bases GGGAATTGTCTTGTTTGCATAAAAAAAGATTTATATTTCTTGCAAAGATGCGAAATTTATTTCTATATTTGCAGAATCAC ACAAATAAAATTTAATACTT
Downstream 100 bases:
>100_bases TACTACAATTAATAAAAAGCTATGCGAGTTCTGCAAGATTTAGTCTTGTTATCATTATTACTTTTGAGTATATCAAAAGT ATATTCTCAAGAAGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKQKLTRALIDEIRKEMPVLTEMEMRCCNGGDGGTTSWDCLFNCMHHMDPSRSAQDYANDYKDIYGLDPTAMGGVPNELI GNVLSVMGFGNTVPGSMTSNRDYYQVATMVNPDGTGHTIIVFAVPDENGKISYFDPTLEGEDGKKVRKVDISDISTIYRI KKADIDTTIGAHEESYGYAYGYFGYGNYEDSYGYGNSYYGNYNYENISDYNGTANSDYSYYN
Sequences:
>Translated_222_residues MKQKLTRALIDEIRKEMPVLTEMEMRCCNGGDGGTTSWDCLFNCMHHMDPSRSAQDYANDYKDIYGLDPTAMGGVPNELI GNVLSVMGFGNTVPGSMTSNRDYYQVATMVNPDGTGHTIIVFAVPDENGKISYFDPTLEGEDGKKVRKVDISDISTIYRI KKADIDTTIGAHEESYGYAYGYFGYGNYEDSYGYGNSYYGNYNYENISDYNGTANSDYSYYN >Mature_222_residues MKQKLTRALIDEIRKEMPVLTEMEMRCCNGGDGGTTSWDCLFNCMHHMDPSRSAQDYANDYKDIYGLDPTAMGGVPNELI GNVLSVMGFGNTVPGSMTSNRDYYQVATMVNPDGTGHTIIVFAVPDENGKISYFDPTLEGEDGKKVRKVDISDISTIYRI KKADIDTTIGAHEESYGYAYGYFGYGNYEDSYGYGNSYYGNYNYENISDYNGTANSDYSYYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24834; Mature: 24834
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKLTRALIDEIRKEMPVLTEMEMRCCNGGDGGTTSWDCLFNCMHHMDPSRSAQDYAND CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH YKDIYGLDPTAMGGVPNELIGNVLSVMGFGNTVPGSMTSNRDYYQVATMVNPDGTGHTII HHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEE VFAVPDENGKISYFDPTLEGEDGKKVRKVDISDISTIYRIKKADIDTTIGAHEESYGYAY EEEEECCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE GYFGYGNYEDSYGYGNSYYGNYNYENISDYNGTANSDYSYYN EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQKLTRALIDEIRKEMPVLTEMEMRCCNGGDGGTTSWDCLFNCMHHMDPSRSAQDYAND CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH YKDIYGLDPTAMGGVPNELIGNVLSVMGFGNTVPGSMTSNRDYYQVATMVNPDGTGHTII HHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEE VFAVPDENGKISYFDPTLEGEDGKKVRKVDISDISTIYRIKKADIDTTIGAHEESYGYAY EEEEECCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE GYFGYGNYEDSYGYGNSYYGNYNYENISDYNGTANSDYSYYN EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA