| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349693
Identifier: 29349693
GI number: 29349693
Start: 5644847
End: 5645392
Strand: Reverse
Name: 29349693
Synonym: BT_4285
Alternate gene names: NA
Gene position: 5645392-5644847 (Counterclockwise)
Preceding gene: 29349694
Following gene: 29349692
Centisome position: 90.18
GC content: 33.52
Gene sequence:
>546_bases ATGAAACAAAAATTAACAAGGGCACTTATTGATGAAATTCGAAAAGAAATGCCTGTATTGAGTCAAAATGAAGAAAAAGG AGTAATCGGAGGTACTTTATATGTAATTGGAGTGGATGGGCGTGTACTTTACTCTAACGAAACAAATACAGATGAGGTTC TTGTATCAATGGGATCATGGGATGGGGCTCCAACAATGGAATTGCCTAAAGGTACATCTTTTCAAATATCTTCTGGTCAA TTGGTTATTGAAGGTACTAGTGAACAGAATCGAGATATCTATAGTTTTTTAACTCAAAATACTTCTGTAGAATGGTCTAT GTGCGTGGATAGTTCAACTTATCATTTTTTCGCAGGTACCAATCATCAAGAAAAAGAAGTGTCAATGGCGTATAGTGGAT GTGATATAAAATATCATAACCATCAGAGTGAATATGCTAACTATCCAAGTGATGCAGACTATGAAACAAAGAGTAAATTA CAAGAAATTGGATATAAAGAATTTTATATTTATCATGAGCCAACTGATACCTATATTCCATATTGA
Upstream 100 bases:
>100_bases AGCTAAAGAAAAGTCCGCTGATAATTAAGATGCAAATAAGATGGGGATTTATCCCATCGTTTCTATATTTGTGAAATCAC AAAACTAAAATCAAACACTT
Downstream 100 bases:
>100_bases GAACAACAATTATGAAAAATAGAATTATATCACTTTTCATATATTTATTGCCTAGTTTAATCTATGCTCAAAATAATGCA GACGACAAATATGAGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKQKLTRALIDEIRKEMPVLSQNEEKGVIGGTLYVIGVDGRVLYSNETNTDEVLVSMGSWDGAPTMELPKGTSFQISSGQ LVIEGTSEQNRDIYSFLTQNTSVEWSMCVDSSTYHFFAGTNHQEKEVSMAYSGCDIKYHNHQSEYANYPSDADYETKSKL QEIGYKEFYIYHEPTDTYIPY
Sequences:
>Translated_181_residues MKQKLTRALIDEIRKEMPVLSQNEEKGVIGGTLYVIGVDGRVLYSNETNTDEVLVSMGSWDGAPTMELPKGTSFQISSGQ LVIEGTSEQNRDIYSFLTQNTSVEWSMCVDSSTYHFFAGTNHQEKEVSMAYSGCDIKYHNHQSEYANYPSDADYETKSKL QEIGYKEFYIYHEPTDTYIPY >Mature_181_residues MKQKLTRALIDEIRKEMPVLSQNEEKGVIGGTLYVIGVDGRVLYSNETNTDEVLVSMGSWDGAPTMELPKGTSFQISSGQ LVIEGTSEQNRDIYSFLTQNTSVEWSMCVDSSTYHFFAGTNHQEKEVSMAYSGCDIKYHNHQSEYANYPSDADYETKSKL QEIGYKEFYIYHEPTDTYIPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20609; Mature: 20609
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKLTRALIDEIRKEMPVLSQNEEKGVIGGTLYVIGVDGRVLYSNETNTDEVLVSMGSW CCHHHHHHHHHHHHHHCCCCCCCCCCCEECEEEEEEECCCEEEECCCCCCCCEEEEECCC DGAPTMELPKGTSFQISSGQLVIEGTSEQNRDIYSFLTQNTSVEWSMCVDSSTYHFFAGT CCCCCCCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCEEEEEECC NHQEKEVSMAYSGCDIKYHNHQSEYANYPSDADYETKSKLQEIGYKEFYIYHEPTDTYIP CCCCCEEEEEECCCEEEECCCCHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCC Y C >Mature Secondary Structure MKQKLTRALIDEIRKEMPVLSQNEEKGVIGGTLYVIGVDGRVLYSNETNTDEVLVSMGSW CCHHHHHHHHHHHHHHCCCCCCCCCCCEECEEEEEEECCCEEEECCCCCCCCEEEEECCC DGAPTMELPKGTSFQISSGQLVIEGTSEQNRDIYSFLTQNTSVEWSMCVDSSTYHFFAGT CCCCCCCCCCCCEEEEECCEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCEEEEEECC NHQEKEVSMAYSGCDIKYHNHQSEYANYPSDADYETKSKLQEIGYKEFYIYHEPTDTYIP CCCCCEEEEEECCCEEEECCCCHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA