Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349692

Identifier: 29349692

GI number: 29349692

Start: 5643885

End: 5644835

Strand: Reverse

Name: 29349692

Synonym: BT_4284

Alternate gene names: NA

Gene position: 5644835-5643885 (Counterclockwise)

Preceding gene: 29349693

Following gene: 29349691

Centisome position: 90.17

GC content: 31.55

Gene sequence:

>951_bases
ATGAAAAATAGAATTATATCACTTTTCATATATTTATTGCCTAGTTTAATCTATGCTCAAAATAATGCAGACGACAAATA
TGAGATTCTGTCTCTAACTGACATGTTTAGTCTTTTCAAAGATAGTAAAAATAGTGTTCCTCAAGATTATGACGAAATAT
ATGTTCCCGGTTACTTCTATGAGCCTTCTTTTATGTATCCTTCACCTTTAAAGAAAGAATTTTGTTGTGTAGCTCAATGG
AGAATCCCAAACAGAAACTGTAAGTATCTATTTTTAGAAGATATATTTCCGCAAAACAAAGATTCCTTAAAACAAGCTTC
TCTTGAATTACAAAAAATAAAAGAGAAATATGGAATGAGAGAATCAGCTATGTATCAAGATGTGCCCGCAGGTTATAATG
GTATAATTGCCAAATGGTTCACTGGTAGATTATTCGTTTTGCATTGCCCAAGAAAGCTATTTAATACAGTTGTATCAAAG
AAAGCTTCACTCATATCCATTCATAAAGGTAGGATATCTGACGAAAAACAAATAACTCCAGATGAGGGTAAGTTTGAATC
TTCTTGTTTTCCACAAAAAGGAGGCATGATATTAATACGCGAAGACGGATGTTGGTATGATGACATTAAAAGGAATATAG
ATTTTTTAATCTCTCCCCTAATTAATGAAAATTTTCCTACAGAATTTAGCAAACATGTTGGGAGGGAATATTCATTTCTA
TTGGAAGTAGTCCCTAAAACAGGACAAATTATTCCACACCTCTTATTGCCGAAAACATTATCTACCGACGAGAAAATGAT
TGTATCTTATTTAGAAAAACAAATAAGGAAGTTTCCTGAAAACAGTTTTGGCCCCCTGATAACCATTGACAAGAAAATGT
TATATGGTCGATATTTAAAATTTATTGTAAAAGATGAAAAGTTTAAGATTGAAGACTACCTTGAATATTGA

Upstream 100 bases:

>100_bases
ACTATGAAACAAAGAGTAAATTACAAGAAATTGGATATAAAGAATTTTATATTTATCATGAGCCAACTGATACCTATATT
CCATATTGAGAACAACAATT

Downstream 100 bases:

>100_bases
TATTAAGTCAAGAAACAATACTAAGTCACTGATTTCGAACACTGCTTATTGAAATTGCCACAAAGAAGGACTACAACCAT
TCTGCCATAGTACAATTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFYEPSFMYPSPLKKEFCCVAQW
RIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMRESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSK
KASLISIHKGRISDEKQITPDEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL
LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLKFIVKDEKFKIEDYLEY

Sequences:

>Translated_316_residues
MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFYEPSFMYPSPLKKEFCCVAQW
RIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMRESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSK
KASLISIHKGRISDEKQITPDEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL
LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLKFIVKDEKFKIEDYLEY
>Mature_316_residues
MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFYEPSFMYPSPLKKEFCCVAQW
RIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMRESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSK
KASLISIHKGRISDEKQITPDEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL
LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLKFIVKDEKFKIEDYLEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37114; Mature: 37114

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFY
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEECCCEEE
EPSFMYPSPLKKEFCCVAQWRIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMR
CCCCCCCCCCCHHHEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
ESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSKKASLISIHKGRISDEKQITP
HHHHHHCCCCCCCCEEEEHHCCCEEEEECCHHHHHHHHHCCHHEEEEECCCCCCCCCCCC
DEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHCHHHHHH
LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLK
HHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
FIVKDEKFKIEDYLEY
HHHCCCCCCHHHHHCC
>Mature Secondary Structure
MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFY
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEECCCEEE
EPSFMYPSPLKKEFCCVAQWRIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMR
CCCCCCCCCCCHHHEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
ESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSKKASLISIHKGRISDEKQITP
HHHHHHCCCCCCCCEEEEHHCCCEEEEECCHHHHHHHHHCCHHEEEEECCCCCCCCCCCC
DEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHCHHHHHH
LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLK
HHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
FIVKDEKFKIEDYLEY
HHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA