| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349692
Identifier: 29349692
GI number: 29349692
Start: 5643885
End: 5644835
Strand: Reverse
Name: 29349692
Synonym: BT_4284
Alternate gene names: NA
Gene position: 5644835-5643885 (Counterclockwise)
Preceding gene: 29349693
Following gene: 29349691
Centisome position: 90.17
GC content: 31.55
Gene sequence:
>951_bases ATGAAAAATAGAATTATATCACTTTTCATATATTTATTGCCTAGTTTAATCTATGCTCAAAATAATGCAGACGACAAATA TGAGATTCTGTCTCTAACTGACATGTTTAGTCTTTTCAAAGATAGTAAAAATAGTGTTCCTCAAGATTATGACGAAATAT ATGTTCCCGGTTACTTCTATGAGCCTTCTTTTATGTATCCTTCACCTTTAAAGAAAGAATTTTGTTGTGTAGCTCAATGG AGAATCCCAAACAGAAACTGTAAGTATCTATTTTTAGAAGATATATTTCCGCAAAACAAAGATTCCTTAAAACAAGCTTC TCTTGAATTACAAAAAATAAAAGAGAAATATGGAATGAGAGAATCAGCTATGTATCAAGATGTGCCCGCAGGTTATAATG GTATAATTGCCAAATGGTTCACTGGTAGATTATTCGTTTTGCATTGCCCAAGAAAGCTATTTAATACAGTTGTATCAAAG AAAGCTTCACTCATATCCATTCATAAAGGTAGGATATCTGACGAAAAACAAATAACTCCAGATGAGGGTAAGTTTGAATC TTCTTGTTTTCCACAAAAAGGAGGCATGATATTAATACGCGAAGACGGATGTTGGTATGATGACATTAAAAGGAATATAG ATTTTTTAATCTCTCCCCTAATTAATGAAAATTTTCCTACAGAATTTAGCAAACATGTTGGGAGGGAATATTCATTTCTA TTGGAAGTAGTCCCTAAAACAGGACAAATTATTCCACACCTCTTATTGCCGAAAACATTATCTACCGACGAGAAAATGAT TGTATCTTATTTAGAAAAACAAATAAGGAAGTTTCCTGAAAACAGTTTTGGCCCCCTGATAACCATTGACAAGAAAATGT TATATGGTCGATATTTAAAATTTATTGTAAAAGATGAAAAGTTTAAGATTGAAGACTACCTTGAATATTGA
Upstream 100 bases:
>100_bases ACTATGAAACAAAGAGTAAATTACAAGAAATTGGATATAAAGAATTTTATATTTATCATGAGCCAACTGATACCTATATT CCATATTGAGAACAACAATT
Downstream 100 bases:
>100_bases TATTAAGTCAAGAAACAATACTAAGTCACTGATTTCGAACACTGCTTATTGAAATTGCCACAAAGAAGGACTACAACCAT TCTGCCATAGTACAATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFYEPSFMYPSPLKKEFCCVAQW RIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMRESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSK KASLISIHKGRISDEKQITPDEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLKFIVKDEKFKIEDYLEY
Sequences:
>Translated_316_residues MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFYEPSFMYPSPLKKEFCCVAQW RIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMRESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSK KASLISIHKGRISDEKQITPDEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLKFIVKDEKFKIEDYLEY >Mature_316_residues MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFYEPSFMYPSPLKKEFCCVAQW RIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMRESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSK KASLISIHKGRISDEKQITPDEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLKFIVKDEKFKIEDYLEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37114; Mature: 37114
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFY CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEECCCEEE EPSFMYPSPLKKEFCCVAQWRIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMR CCCCCCCCCCCHHHEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC ESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSKKASLISIHKGRISDEKQITP HHHHHHCCCCCCCCEEEEHHCCCEEEEECCHHHHHHHHHCCHHEEEEECCCCCCCCCCCC DEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL CCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHCHHHHHH LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLK HHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH FIVKDEKFKIEDYLEY HHHCCCCCCHHHHHCC >Mature Secondary Structure MKNRIISLFIYLLPSLIYAQNNADDKYEILSLTDMFSLFKDSKNSVPQDYDEIYVPGYFY CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEECCCEEE EPSFMYPSPLKKEFCCVAQWRIPNRNCKYLFLEDIFPQNKDSLKQASLELQKIKEKYGMR CCCCCCCCCCCHHHEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC ESAMYQDVPAGYNGIIAKWFTGRLFVLHCPRKLFNTVVSKKASLISIHKGRISDEKQITP HHHHHHCCCCCCCCEEEEHHCCCEEEEECCHHHHHHHHHCCHHEEEEECCCCCCCCCCCC DEGKFESSCFPQKGGMILIREDGCWYDDIKRNIDFLISPLINENFPTEFSKHVGREYSFL CCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHCHHHHHH LEVVPKTGQIIPHLLLPKTLSTDEKMIVSYLEKQIRKFPENSFGPLITIDKKMLYGRYLK HHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH FIVKDEKFKIEDYLEY HHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA