| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349691
Identifier: 29349691
GI number: 29349691
Start: 5642752
End: 5643741
Strand: Reverse
Name: 29349691
Synonym: BT_4283
Alternate gene names: NA
Gene position: 5643741-5642752 (Counterclockwise)
Preceding gene: 29349692
Following gene: 29349690
Centisome position: 90.15
GC content: 28.18
Gene sequence:
>990_bases ATGAAAAATAATTTTTTGGTGAACTTTATATTATTACATGGATATTCATTAGACAACTCTAGTCTGATGTTTGGTAAAAT GGGGTATTCTTTAATTCTTTTCGAATATTCTCACTATTTTAAGGATGCTTTAGCTGAAAAACATGCTTTTGAGTTATTGC AAGAGGTACTAGCTTCTCCTATGAAAAGCAATACATTTAATGAAGGAAAAATGGGAATAGCATGGTCTCTTATTCATCTT ATTGAAAAAGAATATATTGAAGCTGATTATCTGGAATTATATGGTCAAGAACATAAAGAAATAGTAGCATTCATAAAACA ATTAAAAACAGATATGAACAATATTGTATCTAAAAACGACGCTATATCGTTTTTAATAGCTTCTAAATCATATATTCAGG AATCTGATTTTGATGAAATACTTCCCAATTTAATAGAGAACCTCTATGATTACCTAAAACAAATTCCTAAAAGTTTGTTT GAACGTAATTTGTTCTATTACCATGCTACGAAAATGCTCTGTCTCTATAATCTTTATGAAGAATTAAGTATTCGAGGAGA AACATTAATTGACATAATAGTACAAACACATAAAAAATTAATCAGTGATAAACATGTTTGTACTAATATATCATTTGGAG TCAATCTTTTGCAATATGGTTTGTGCCATAAACGCAAAGATATCATAAAGCTGGCAAATGCGATTATAAAATGCTACTTT TCAAATATGGTTTTGGAAACCCTAAACTTAAAAGAATCAATTGATGCTATTTACAATCTGAATAAATTACAACTTCTTAA TAAAGAAAGTGAATGGACATCTTTAAAGAAACAATTGTCAAGCCTCTTGTTTAATAAAGAATCTTATTTATATAAAGAAA ATCGGCTGACATTAAGTAGACTAAAAGGAGGAATTCCCCAATTGTTACTTATGGAATGTCTTAATTTCCAAGATATAAAA TCCACCGGACACTATATAATGCTGAAATGA
Upstream 100 bases:
>100_bases GCTTATTGAAATTGCCACAAAGAAGGACTACAACCATTCTGCCATAGTACAATTCAATATTGAAGATTTCCCTATTAAAG CGAGTTAATATAAACGAAGT
Downstream 100 bases:
>100_bases TAGAAAAAAATGTTGTAATCCTCAGAATAGAAACTGGCAATCCATCCGGTGTTGTACGCTATATTCAAATGTTAACAGAA GGTATGAAACATATGAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKNNFLVNFILLHGYSLDNSSLMFGKMGYSLILFEYSHYFKDALAEKHAFELLQEVLASPMKSNTFNEGKMGIAWSLIHL IEKEYIEADYLELYGQEHKEIVAFIKQLKTDMNNIVSKNDAISFLIASKSYIQESDFDEILPNLIENLYDYLKQIPKSLF ERNLFYYHATKMLCLYNLYEELSIRGETLIDIIVQTHKKLISDKHVCTNISFGVNLLQYGLCHKRKDIIKLANAIIKCYF SNMVLETLNLKESIDAIYNLNKLQLLNKESEWTSLKKQLSSLLFNKESYLYKENRLTLSRLKGGIPQLLLMECLNFQDIK STGHYIMLK
Sequences:
>Translated_329_residues MKNNFLVNFILLHGYSLDNSSLMFGKMGYSLILFEYSHYFKDALAEKHAFELLQEVLASPMKSNTFNEGKMGIAWSLIHL IEKEYIEADYLELYGQEHKEIVAFIKQLKTDMNNIVSKNDAISFLIASKSYIQESDFDEILPNLIENLYDYLKQIPKSLF ERNLFYYHATKMLCLYNLYEELSIRGETLIDIIVQTHKKLISDKHVCTNISFGVNLLQYGLCHKRKDIIKLANAIIKCYF SNMVLETLNLKESIDAIYNLNKLQLLNKESEWTSLKKQLSSLLFNKESYLYKENRLTLSRLKGGIPQLLLMECLNFQDIK STGHYIMLK >Mature_329_residues MKNNFLVNFILLHGYSLDNSSLMFGKMGYSLILFEYSHYFKDALAEKHAFELLQEVLASPMKSNTFNEGKMGIAWSLIHL IEKEYIEADYLELYGQEHKEIVAFIKQLKTDMNNIVSKNDAISFLIASKSYIQESDFDEILPNLIENLYDYLKQIPKSLF ERNLFYYHATKMLCLYNLYEELSIRGETLIDIIVQTHKKLISDKHVCTNISFGVNLLQYGLCHKRKDIIKLANAIIKCYF SNMVLETLNLKESIDAIYNLNKLQLLNKESEWTSLKKQLSSLLFNKESYLYKENRLTLSRLKGGIPQLLLMECLNFQDIK STGHYIMLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38420; Mature: 38420
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNFLVNFILLHGYSLDNSSLMFGKMGYSLILFEYSHYFKDALAEKHAFELLQEVLASP CCCCEEEEEHEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MKSNTFNEGKMGIAWSLIHLIEKEYIEADYLELYGQEHKEIVAFIKQLKTDMNNIVSKND HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC AISFLIASKSYIQESDFDEILPNLIENLYDYLKQIPKSLFERNLFYYHATKMLCLYNLYE HHEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ELSIRGETLIDIIVQTHKKLISDKHVCTNISFGVNLLQYGLCHKRKDIIKLANAIIKCYF HHHCCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNMVLETLNLKESIDAIYNLNKLQLLNKESEWTSLKKQLSSLLFNKESYLYKENRLTLSR HHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHH LKGGIPQLLLMECLNFQDIKSTGHYIMLK HCCCCHHHHHHHHCCCHHHHCCCCEEEEC >Mature Secondary Structure MKNNFLVNFILLHGYSLDNSSLMFGKMGYSLILFEYSHYFKDALAEKHAFELLQEVLASP CCCCEEEEEHEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MKSNTFNEGKMGIAWSLIHLIEKEYIEADYLELYGQEHKEIVAFIKQLKTDMNNIVSKND HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC AISFLIASKSYIQESDFDEILPNLIENLYDYLKQIPKSLFERNLFYYHATKMLCLYNLYE HHEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ELSIRGETLIDIIVQTHKKLISDKHVCTNISFGVNLLQYGLCHKRKDIIKLANAIIKCYF HHHCCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNMVLETLNLKESIDAIYNLNKLQLLNKESEWTSLKKQLSSLLFNKESYLYKENRLTLSR HHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHH LKGGIPQLLLMECLNFQDIKSTGHYIMLK HCCCCHHHHHHHHCCCHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA