| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349688
Identifier: 29349688
GI number: 29349688
Start: 5638920
End: 5640653
Strand: Reverse
Name: 29349688
Synonym: BT_4280
Alternate gene names: NA
Gene position: 5640653-5638920 (Counterclockwise)
Preceding gene: 29349689
Following gene: 29349687
Centisome position: 90.1
GC content: 36.51
Gene sequence:
>1734_bases ATGAATATCGCTTTTTTATCTTCATCAAACCCTAATGATCAAAATAACTGGTCAGGTACTCTTTACTCTCTATACACTTC ACTTCAAAAGAAACATAGGGTGATATGGGTAGGCGAAACTGTGTTTGCTGAGGTTTGGGAATTCCACAAAGCCAATTTCA AAAACAATGAAACATTCTTTCCTGAAAATTATGCGTTGCTTTTTGGTAAATTGTTTTCTGACCTATTGAAAAAGGAATGT TATGATGTAATTATATGCCGAGATTATTTCTTTGCCGCATATCTCGTTTCGGATATACCACTTATTTATATTGGAGATAC TACATTTCATCTGTTTAATCAATACATGAACTGGCAGGACAAAAGTCTTACCAAACTAGCCGAACAACTGGAATCACTCG CTATACAAAAGGTGGATAAAATTATTTATTGTTCGGAATGGGCAAAACAGAGCGCAATGCAGGATTACAATGCTGATGCC GAGAACATAGAAGTGGTTGAATTTGGAGCGAATATCACAGAGAACATCCCGATTCCAGATAACGTATCGCCGATAAATGC ACCATGTAACCTCTTATTTATCGGAAGAAATTGGAATATGAAAGGTGGAAATAAAGTACTTGAAATTTATCATAATCTAA AAGGAAGGGGATTTCAATGTACGCTTACTATTGTAGGAAGTGAACCTCCAATGTCCTTACCAAATGATCCGAATATTGAA ATATACCCTTTTATCGACAAAACAAACTCCAATGACAGGTTAAAATTCCATGAGATCCTGACACGATCGCATTTTCTGAT TCTGCCCACTCGCTTTGATTGTTTTGGAATAGTTTTCTGCGAAGCATGCGCCTATGGTATTCCATCGTTAGGCACTAATG TAGGAGGTGTATCACAGGTTATCAAAGAACGAGAAAATGGATTTCTGTTCAACATCGATGCTTCTTCGCTGGAATATGCT GATAAAATAGAAGAGATATTCAATAACCATATAACATATTCCAAACTAAGGAAAACTGCACGAAAGGATTTTGAAGAACG TTTAAACTGGGATATATGGCTCGATAAAAGCAATAAGATTATAGAACAGCTTGCATCCGAGCATCAACCGGATTTTTATC TTCCGGTTTATGTTATCAATATGAGAGAAAGAGTGGAACGTAAACAACATATTACTAAGGAGTTCGACAACAAGGAAGAA TTCGAGTTAAATTGGGTAGAGGCTTCGGCCCATCCTATCGGTGCAGTAGGTTTATGGAATAGTATGATCAAAATCATAAA AATGGCAAAAGAGAAAGGAGATGACATCATTGTCATTTGCGAAGACGACCATTATTTCACGGAAAATTATTCTCCCAAAT TACTGTTCAAAGAAGTTACAGAAGCTTATATACAAGGAGCGGAAGTACTTTCCGGTGGTATTGGAGGATTTGGACAAGCG ATCCCTGCAGGATATCATCGTTATAAAGTTGACTGGTTTTGGTGCACACAGTTCATTGTTATTTATAATCGTTTTTTTGA TAAGATGCTGGATTATTCGTTTCAGAATACTGACACAGCCGATGGAGTAATATCCAAACTAGCCACAAACATAATGGTTA TCTATCCTTTTATCTCAGAACAAAAGGATTTTGGGTACTCGGATGTTACTCAGAGTAATATGGAACAGCAGGGTAAAATA AGAGAGCATTTTGCAAGAGCGAATAAACACATGAAATCAATAAGTCTGAAATAA
Upstream 100 bases:
>100_bases CGTTTTTTTGTGAATCTATTTAATAGAATACAACGCGATACAATGGTTTAATCTTTCAATTGAAAATTAATAAATTATTT TAGATAGAATTAGAACAACC
Downstream 100 bases:
>100_bases AAGAAAGATTGATGACAATGATAAACTTATTATTTATACAAAATAAAATAGTCTAATGGAAAATCTCATTTTTGATATAG GTTTTCATAAAGGAGAAGAT
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycogen Synthase; Glycogen Synthase Corynebacterium Family; Glycosyl Hydrolase Family
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MNIAFLSSSNPNDQNNWSGTLYSLYTSLQKKHRVIWVGETVFAEVWEFHKANFKNNETFFPENYALLFGKLFSDLLKKEC YDVIICRDYFFAAYLVSDIPLIYIGDTTFHLFNQYMNWQDKSLTKLAEQLESLAIQKVDKIIYCSEWAKQSAMQDYNADA ENIEVVEFGANITENIPIPDNVSPINAPCNLLFIGRNWNMKGGNKVLEIYHNLKGRGFQCTLTIVGSEPPMSLPNDPNIE IYPFIDKTNSNDRLKFHEILTRSHFLILPTRFDCFGIVFCEACAYGIPSLGTNVGGVSQVIKERENGFLFNIDASSLEYA DKIEEIFNNHITYSKLRKTARKDFEERLNWDIWLDKSNKIIEQLASEHQPDFYLPVYVINMRERVERKQHITKEFDNKEE FELNWVEASAHPIGAVGLWNSMIKIIKMAKEKGDDIIVICEDDHYFTENYSPKLLFKEVTEAYIQGAEVLSGGIGGFGQA IPAGYHRYKVDWFWCTQFIVIYNRFFDKMLDYSFQNTDTADGVISKLATNIMVIYPFISEQKDFGYSDVTQSNMEQQGKI REHFARANKHMKSISLK
Sequences:
>Translated_577_residues MNIAFLSSSNPNDQNNWSGTLYSLYTSLQKKHRVIWVGETVFAEVWEFHKANFKNNETFFPENYALLFGKLFSDLLKKEC YDVIICRDYFFAAYLVSDIPLIYIGDTTFHLFNQYMNWQDKSLTKLAEQLESLAIQKVDKIIYCSEWAKQSAMQDYNADA ENIEVVEFGANITENIPIPDNVSPINAPCNLLFIGRNWNMKGGNKVLEIYHNLKGRGFQCTLTIVGSEPPMSLPNDPNIE IYPFIDKTNSNDRLKFHEILTRSHFLILPTRFDCFGIVFCEACAYGIPSLGTNVGGVSQVIKERENGFLFNIDASSLEYA DKIEEIFNNHITYSKLRKTARKDFEERLNWDIWLDKSNKIIEQLASEHQPDFYLPVYVINMRERVERKQHITKEFDNKEE FELNWVEASAHPIGAVGLWNSMIKIIKMAKEKGDDIIVICEDDHYFTENYSPKLLFKEVTEAYIQGAEVLSGGIGGFGQA IPAGYHRYKVDWFWCTQFIVIYNRFFDKMLDYSFQNTDTADGVISKLATNIMVIYPFISEQKDFGYSDVTQSNMEQQGKI REHFARANKHMKSISLK >Mature_577_residues MNIAFLSSSNPNDQNNWSGTLYSLYTSLQKKHRVIWVGETVFAEVWEFHKANFKNNETFFPENYALLFGKLFSDLLKKEC YDVIICRDYFFAAYLVSDIPLIYIGDTTFHLFNQYMNWQDKSLTKLAEQLESLAIQKVDKIIYCSEWAKQSAMQDYNADA ENIEVVEFGANITENIPIPDNVSPINAPCNLLFIGRNWNMKGGNKVLEIYHNLKGRGFQCTLTIVGSEPPMSLPNDPNIE IYPFIDKTNSNDRLKFHEILTRSHFLILPTRFDCFGIVFCEACAYGIPSLGTNVGGVSQVIKERENGFLFNIDASSLEYA DKIEEIFNNHITYSKLRKTARKDFEERLNWDIWLDKSNKIIEQLASEHQPDFYLPVYVINMRERVERKQHITKEFDNKEE FELNWVEASAHPIGAVGLWNSMIKIIKMAKEKGDDIIVICEDDHYFTENYSPKLLFKEVTEAYIQGAEVLSGGIGGFGQA IPAGYHRYKVDWFWCTQFIVIYNRFFDKMLDYSFQNTDTADGVISKLATNIMVIYPFISEQKDFGYSDVTQSNMEQQGKI REHFARANKHMKSISLK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66803; Mature: 66803
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAFLSSSNPNDQNNWSGTLYSLYTSLQKKHRVIWVGETVFAEVWEFHKANFKNNETFF CEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCCC PENYALLFGKLFSDLLKKECYDVIICRDYFFAAYLVSDIPLIYIGDTTFHLFNQYMNWQD CCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCC KSLTKLAEQLESLAIQKVDKIIYCSEWAKQSAMQDYNADAENIEVVEFGANITENIPIPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC NVSPINAPCNLLFIGRNWNMKGGNKVLEIYHNLKGRGFQCTLTIVGSEPPMSLPNDPNIE CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCEE IYPFIDKTNSNDRLKFHEILTRSHFLILPTRFDCFGIVFCEACAYGIPSLGTNVGGVSQV EEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH IKERENGFLFNIDASSLEYADKIEEIFNNHITYSKLRKTARKDFEERLNWDIWLDKSNKI HHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHH IEQLASEHQPDFYLPVYVINMRERVERKQHITKEFDNKEEFELNWVEASAHPIGAVGLWN HHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHH SMIKIIKMAKEKGDDIIVICEDDHYFTENYSPKLLFKEVTEAYIQGAEVLSGGIGGFGQA HHHHHHHHHHHCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCC IPAGYHRYKVDWFWCTQFIVIYNRFFDKMLDYSFQNTDTADGVISKLATNIMVIYPFISE CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCC QKDFGYSDVTQSNMEQQGKIREHFARANKHMKSISLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIAFLSSSNPNDQNNWSGTLYSLYTSLQKKHRVIWVGETVFAEVWEFHKANFKNNETFF CEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCCC PENYALLFGKLFSDLLKKECYDVIICRDYFFAAYLVSDIPLIYIGDTTFHLFNQYMNWQD CCHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCC KSLTKLAEQLESLAIQKVDKIIYCSEWAKQSAMQDYNADAENIEVVEFGANITENIPIPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC NVSPINAPCNLLFIGRNWNMKGGNKVLEIYHNLKGRGFQCTLTIVGSEPPMSLPNDPNIE CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCEE IYPFIDKTNSNDRLKFHEILTRSHFLILPTRFDCFGIVFCEACAYGIPSLGTNVGGVSQV EEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH IKERENGFLFNIDASSLEYADKIEEIFNNHITYSKLRKTARKDFEERLNWDIWLDKSNKI HHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHH IEQLASEHQPDFYLPVYVINMRERVERKQHITKEFDNKEEFELNWVEASAHPIGAVGLWN HHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHH SMIKIIKMAKEKGDDIIVICEDDHYFTENYSPKLLFKEVTEAYIQGAEVLSGGIGGFGQA HHHHHHHHHHHCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCC IPAGYHRYKVDWFWCTQFIVIYNRFFDKMLDYSFQNTDTADGVISKLATNIMVIYPFISE CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCC QKDFGYSDVTQSNMEQQGKIREHFARANKHMKSISLK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA