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The map label for this gene is yibD [C]

Identifier: 29349689

GI number: 29349689

Start: 5640703

End: 5641536

Strand: Reverse

Name: yibD [C]

Synonym: BT_4281

Alternate gene names: 29349689

Gene position: 5641536-5640703 (Counterclockwise)

Preceding gene: 29349690

Following gene: 29349688

Centisome position: 90.12

GC content: 32.97

Gene sequence:

>834_bases
ATGCCTGAAATAACAGTTCTAATGCCCGTCAGAAATGGTGAGAGATATATAAAAGAATCTATTGATAGTGTTTTGAATCA
AACACTGACCGACTTTGAGTTTCTTATTATAGATGATGGTTCAACAGACCGGACAGTAGAAATCATTCAAGGATATACAG
ACAAAAGAATACGTTTAGTCAGAAAGGAGCATCAATTTATTCAAAACTTAAATGAAGGATTAGAGTTGGCTTCCGGCTCT
TATATTGCACGCATGGATGCCGATGATATAATGCATACAGAACGATTAAGAATTCAATTAAAACGTATGAAAAAAAATCC
GGATATTACAGTTTGTGGAACATGGGCTAAGATTTTCAGCGATAAGGGCAACGAAAGAAATGTTTCCCACCTTGGATATG
GAATCATACACGAACCTGTGTTGGAATTACTAAAATACAACATGCTACTTCATCCTAGTGTGATGATTAAAAAAGAGTTT
CTGCTTAATCACCATATTGAATATCAAAATTACCCCTGTGTGGAAGATTATAAATTGTGGTTTGATATAGCGAAAGCTGG
AGGAATATTATTTGTAGAACCACAAGAACTATTAATGTTTAGAAGAAGTGATACGCAGGTCACCGTAACGAAGAAAAAGG
AAATGTCTTTAGGTTCTATCCGTTTGAGAAAGGAAATTCTTCTCTATCTTCTCTCTATATATAATAATAAAACATTAAAT
AGCCTATTATCCGACTTTGAAAATTTAGAAAAGAATAAATGGATGTCTAATGAAGACATTTTTCGTTTTTTTGTGAATCT
ATTTAATAGAATACAACGCGATACAATGGTTTAA

Upstream 100 bases:

>100_bases
CTGAGCACAAATGCAATCAAGAACTACCAAGAAAGATTCACTCTGGAAAAGATGATAGAGAATACGATTAATGTATATGA
ACAATTAATAGAACAAGACA

Downstream 100 bases:

>100_bases
TCTTTCAATTGAAAATTAATAAATTATTTTAGATAGAATTAGAACAACCATGAATATCGCTTTTTTATCTTCATCAAACC
CTAATGATCAAAATAACTGG

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPEITVLMPVRNGERYIKESIDSVLNQTLTDFEFLIIDDGSTDRTVEIIQGYTDKRIRLVRKEHQFIQNLNEGLELASGS
YIARMDADDIMHTERLRIQLKRMKKNPDITVCGTWAKIFSDKGNERNVSHLGYGIIHEPVLELLKYNMLLHPSVMIKKEF
LLNHHIEYQNYPCVEDYKLWFDIAKAGGILFVEPQELLMFRRSDTQVTVTKKKEMSLGSIRLRKEILLYLLSIYNNKTLN
SLLSDFENLEKNKWMSNEDIFRFFVNLFNRIQRDTMV

Sequences:

>Translated_277_residues
MPEITVLMPVRNGERYIKESIDSVLNQTLTDFEFLIIDDGSTDRTVEIIQGYTDKRIRLVRKEHQFIQNLNEGLELASGS
YIARMDADDIMHTERLRIQLKRMKKNPDITVCGTWAKIFSDKGNERNVSHLGYGIIHEPVLELLKYNMLLHPSVMIKKEF
LLNHHIEYQNYPCVEDYKLWFDIAKAGGILFVEPQELLMFRRSDTQVTVTKKKEMSLGSIRLRKEILLYLLSIYNNKTLN
SLLSDFENLEKNKWMSNEDIFRFFVNLFNRIQRDTMV
>Mature_276_residues
PEITVLMPVRNGERYIKESIDSVLNQTLTDFEFLIIDDGSTDRTVEIIQGYTDKRIRLVRKEHQFIQNLNEGLELASGSY
IARMDADDIMHTERLRIQLKRMKKNPDITVCGTWAKIFSDKGNERNVSHLGYGIIHEPVLELLKYNMLLHPSVMIKKEFL
LNHHIEYQNYPCVEDYKLWFDIAKAGGILFVEPQELLMFRRSDTQVTVTKKKEMSLGSIRLRKEILLYLLSIYNNKTLNS
LLSDFENLEKNKWMSNEDIFRFFVNLFNRIQRDTMV

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=90, Percent_Identity=35.5555555555556, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 32673; Mature: 32542

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEITVLMPVRNGERYIKESIDSVLNQTLTDFEFLIIDDGSTDRTVEIIQGYTDKRIRLV
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCHHHHHHH
RKEHQFIQNLNEGLELASGSYIARMDADDIMHTERLRIQLKRMKKNPDITVCGTWAKIFS
HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHC
DKGNERNVSHLGYGIIHEPVLELLKYNMLLHPSVMIKKEFLLNHHIEYQNYPCVEDYKLW
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
FDIAKAGGILFVEPQELLMFRRSDTQVTVTKKKEMSLGSIRLRKEILLYLLSIYNNKTLN
HHHHHCCCEEEECHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHH
SLLSDFENLEKNKWMSNEDIFRFFVNLFNRIQRDTMV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEITVLMPVRNGERYIKESIDSVLNQTLTDFEFLIIDDGSTDRTVEIIQGYTDKRIRLV
CCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCHHHHHHH
RKEHQFIQNLNEGLELASGSYIARMDADDIMHTERLRIQLKRMKKNPDITVCGTWAKIFS
HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHC
DKGNERNVSHLGYGIIHEPVLELLKYNMLLHPSVMIKKEFLLNHHIEYQNYPCVEDYKLW
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
FDIAKAGGILFVEPQELLMFRRSDTQVTVTKKKEMSLGSIRLRKEILLYLLSIYNNKTLN
HHHHHCCCEEEECHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHH
SLLSDFENLEKNKWMSNEDIFRFFVNLFNRIQRDTMV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]