| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349542
Identifier: 29349542
GI number: 29349542
Start: 5421598
End: 5423520
Strand: Reverse
Name: 29349542
Synonym: BT_4134
Alternate gene names: NA
Gene position: 5423520-5421598 (Counterclockwise)
Preceding gene: 29349543
Following gene: 29349541
Centisome position: 86.63
GC content: 41.34
Gene sequence:
>1923_bases ATGAAAAAAATTATAGTATCCATATCATTTATTCTTACGGCTATACTATGCAATACATCTTGCAGTGATTACTTGGATAT AGTGCCCGAAGGTACCCCGGACATGGAAACAGCCTTCAGCAACAAGACAAATGCCCGTAAGTTTCTTTTTACTTGTTATA GTTACCTGCCAAAGTGGGATCAAGCCGGTTCCATCGGCTTTCTAGCAGGTGATGAACATTGGTTAATACCCAAAGGTACC GGATTTATAGATCAACGCCTCAGTCTCAACGCTTGGGAAATCGGTCGTGGAGAACAGAACAGTAATGACCCTTATCAGAA TTATTGGGATGGCCTTAATGGAGGAACAAATCTTTGGACTGCTATACGCGACTGCAATATCTTTCTTGAAAATATTGACA AGCCTCTAGATTTACAGCAATATGAACGTAACAGATGGATTGCGGAAGTAAAATTCCTCAAAGCATACTACCACTATTAT CTATTTATGCTCTATGGTCCTATCCCTATCATGGATAACAACATTTCGATAGATGCATCTGCGGAAGAGGTACGACGTTA CCGGGACCCAGTGGACGATGTAGTCAACTATATTTCCAATCTACTGGATGACGCAGCTAAAGATCTGCCTCTTCAAGTCA CTGATGCAGGTGAAGAACTGGGACGAATCACCCAACCAATAGCAAAAGCGGTAAAAGCACAATTGTGGTTATTGGCTGCT AGTCCTCTATTCAATGGAAATACCGATTATATCAACGTAAAAGATAATCAAGGAAGAAGTCTTTTTCCCTCTGAAACAGA TAATAACAAATGGAAACAGGCTGCAGACGCAGCTTTAGACGCCATAAAGTGCGCCAAAGAAGCCGGACATGACCTTTACT ATTTCACTCTGCCCGTTAACGGACTTTCGGATGCTACACGCAAGTTACTTGATATCGGTGAAGCAGTTACAGAGAAATGG AATACGGAAATTATATGGGGAAGTACATGGAACGTCAACGGATTACAAAAGGTAGCAGTAGCCAAAACAACTAAGGGCAG TCACTACGATGCAATATCTGTAATGGCTCCGACCTTAACTGTTGCCGAACAGTTTTATTCCTCTAACGGTGTTCCCATCT CCGAAGATAAAGGAGACTTTTGGTCGAAAAACTACCCAAATCGGTATGATTTCACTATCATTCCTGATGAAGGAAATAAT AAGCATTATCTCAAAATCGGTGAAGAAACGGCGTATCTTCACCTCAACCGAGAGCCACGCTTTTATGCTAACCTATCATT CGATCGTGGAACATGGTACGGCTACGGTTATGCCAGTGATGAACCGAAAGATCTGGCTTTCTATAAATTTCGCGCTAAAG AAGTTTCTGGTCGTATTACTTCCGAAGACTATTCATATACTGGATATTTAAACAAAAAAGTATGTAGCTATAAAACTAGT GTGACTGATAACGGTCTGTCAACGGAACGTTATGCATTTCCGATTATTCGTCTTGCTGATCTGTATCTGATGTATGCGGA AGCACTGAATGAAACGCTCAACACCCCTAACAACGATGTTTATACCTATATTGACTTAGTGCGTGAGCGCGCTGGTCTTG ACGGAGTAAAGGAATCCTGGCAAAAATATTCAAAGTATCCTGAAAAGCCAAACACGAAAACAGGTATGCGTGAAATCATT CGTATGGAACGCTTAAATGAACTAGCTTGTGAAGGAAAACGCTTTTGGGATTTACGTCGTTGGAAGAAGGAACTTCCTCG TGAAGTGAAGGGGTGGTATGTACAAGGAGAAACAGCACAAGAATTTTACCGTGTCACTACGCTTTATCTACGTTCGAGAT ACAGTTTTAAAGATTACTTGTGGCCCTTAAAAGTAGAAACTGTATTGAAAGATCCGAACCTGGGACAGAATCCGGGTTGG TAA
Upstream 100 bases:
>100_bases TTTAAAACATGGGATACGGAAATGGGAGGCAATGGTCTTGGATATCCCGTTCAACGTGTATTTAATATAGGTGTTCAACT TTCACTCTAAAATTTGCTAT
Downstream 100 bases:
>100_bases TCACCGTATTCATGTTATAAAAAACTGGAAAGATGAAAAAAATAAATTATATATTAAAGCTGACAAAATATATGTCTGCG ACTTTAATTGGTATACTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWDQAGSIGFLAGDEHWLIPKGT GFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWTAIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYY LFMLYGPIPIMDNNISIDASAEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVNGLSDATRKLLDIGEAVTEKW NTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLTVAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNN KHYLKIGEETAYLHLNREPRFYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESWQKYSKYPEKPNTKTGMREII RMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQEFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW
Sequences:
>Translated_640_residues MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWDQAGSIGFLAGDEHWLIPKGT GFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWTAIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYY LFMLYGPIPIMDNNISIDASAEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVNGLSDATRKLLDIGEAVTEKW NTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLTVAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNN KHYLKIGEETAYLHLNREPRFYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESWQKYSKYPEKPNTKTGMREII RMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQEFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW >Mature_640_residues MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWDQAGSIGFLAGDEHWLIPKGT GFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWTAIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYY LFMLYGPIPIMDNNISIDASAEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVNGLSDATRKLLDIGEAVTEKW NTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLTVAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNN KHYLKIGEETAYLHLNREPRFYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESWQKYSKYPEKPNTKTGMREII RMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQEFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73676; Mature: 73676
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWD CCEEEEEHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCC QAGSIGFLAGDEHWLIPKGTGFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWT CCCCEEEEECCCEEEEECCCCCHHHCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHH AIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYYLFMLYGPIPIMDNNISIDAS HHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCC AEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHEEEEE SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVN CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC GLSDATRKLLDIGEAVTEKWNTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLT CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHH VAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNNKHYLKIGEETAYLHLNREPR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCC FYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS EEEEEEECCCCEEECCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCEECCCCCHHHHEECC VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH QKYSKYPEKPNTKTGMREIIRMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQ HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCEEEECCHHH EFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW HHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWD CCEEEEEHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCC QAGSIGFLAGDEHWLIPKGTGFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWT CCCCEEEEECCCEEEEECCCCCHHHCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHH AIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYYLFMLYGPIPIMDNNISIDAS HHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCC AEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHEEEEE SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVN CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC GLSDATRKLLDIGEAVTEKWNTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLT CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHH VAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNNKHYLKIGEETAYLHLNREPR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCC FYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS EEEEEEECCCCEEECCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCEECCCCCHHHHEECC VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH QKYSKYPEKPNTKTGMREIIRMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQ HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCEEEECCHHH EFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW HHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA