Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349541

Identifier: 29349541

GI number: 29349541

Start: 5420303

End: 5421565

Strand: Reverse

Name: 29349541

Synonym: BT_4133

Alternate gene names: NA

Gene position: 5421565-5420303 (Counterclockwise)

Preceding gene: 29349542

Following gene: 29349540

Centisome position: 86.6

GC content: 37.53

Gene sequence:

>1263_bases
ATGAAAAAAATAAATTATATATTAAAGCTGACAAAATATATGTCTGCGACTTTAATTGGTATACTGTGTCTTACAGGATG
CGGACAAGACGACAGAATTGGACTTGACGCGACTGACAATATAGCACCGGGATTGCCTAGCAATATAAAAGTAGAAAATA
TTAACGGTGGAGCTATCATCAGCTACACTCCTCCTAAAGATGACGATCTCCTATGTGTAGTAGCTTCTTATATGATCAAT
GGAAAAGAAAGAACTACTAAAGCCTCTCCTTATGTAAACAAACTTACAGTAGAAGGGTTCGGCAAAGTGGGTGACTATCA
AGTGACTCTAAAGAGTATAGATAAAAGCAGGAACGAATCTGAACCACTTTCGGTAACGATAAGCCCGTTGACTCCACCCG
TCGAATTTATTTATAATTCTCTGAAAGTCGAAAATAGTTTTGGCGGGGTTAGTCTGACTTGGGAAAATCCAACAAGGGAA
AACATTATTTTAGAAGTGTTTAAAAAAGATGATGGGGAATGGATATCTCTGGAAAATTTCTATTCTAGTGTACTAAACGG
AGTAGCCAAAATCCGTAATTTGGCTGCAGAACCAATAACACTAGGATATAGAATTCAAGATCGCTGGGAGAACTATTCTC
AGATGCTGGAAAAGGAAAGTACGCCTTTGTATGAAGAAGAACTGTCTAAATCTTTATTCAAGGAAGTTAATCCATTACCT
GGTGATTGTGAAGCAATGTCCGGTTTGCCAATACGAAATATATGGCAAGGTGATTACAACATGGAATGTTTCCATAATAT
TACGAATACGACAAACCCTGCAATTGGAAGGACGATAACTTTTGACATGGGACAGGTAGCCAAAGTCAGTCGTTTTAAAA
TGTATCAGCGTAGAGGAAATGATCCAGTTAATGTATGGGCTTATGACCATAACAATTTAAAAAAATATGTTATCTATGGT
TGTGAAGCACTTACGGATAATATGTATCTAGGAGGTGAAGTAAAAGAAGATGGCATCAAATATCCTACGTTCGAAGGATG
GACAAAAATCATGGAAGTAGAGTGTTATAAACCTTCTGGAAGCGATAACCCTACGAAAACAAATGAAGATTTAGAATATA
TTGAAAACGGTGACGAACATGAGATTCCACTAGATGCACCCAATTTCCGTTACATTCGAATTTACATGCTTGAGAATTGG
AGTGGAGGTACTTATGCACAGATCGGTGAAATGACCTTTTGGGGGCAACCTATCGGGAAATAA

Upstream 100 bases:

>100_bases
ACTTGTGGCCCTTAAAAGTAGAAACTGTATTGAAAGATCCGAACCTGGGACAGAATCCGGGTTGGTAATCACCGTATTCA
TGTTATAAAAAACTGGAAAG

Downstream 100 bases:

>100_bases
CTTAATAATTAGATTATGAAAAATATTATAAACTATATAGTTTGCAGCATGCTAATTCTCGGAATAGCTGCTTGCGGAGA
TATGTATGATGTACACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKKINYILKLTKYMSATLIGILCLTGCGQDDRIGLDATDNIAPGLPSNIKVENINGGAIISYTPPKDDDLLCVVASYMIN
GKERTTKASPYVNKLTVEGFGKVGDYQVTLKSIDKSRNESEPLSVTISPLTPPVEFIYNSLKVENSFGGVSLTWENPTRE
NIILEVFKKDDGEWISLENFYSSVLNGVAKIRNLAAEPITLGYRIQDRWENYSQMLEKESTPLYEEELSKSLFKEVNPLP
GDCEAMSGLPIRNIWQGDYNMECFHNITNTTNPAIGRTITFDMGQVAKVSRFKMYQRRGNDPVNVWAYDHNNLKKYVIYG
CEALTDNMYLGGEVKEDGIKYPTFEGWTKIMEVECYKPSGSDNPTKTNEDLEYIENGDEHEIPLDAPNFRYIRIYMLENW
SGGTYAQIGEMTFWGQPIGK

Sequences:

>Translated_420_residues
MKKINYILKLTKYMSATLIGILCLTGCGQDDRIGLDATDNIAPGLPSNIKVENINGGAIISYTPPKDDDLLCVVASYMIN
GKERTTKASPYVNKLTVEGFGKVGDYQVTLKSIDKSRNESEPLSVTISPLTPPVEFIYNSLKVENSFGGVSLTWENPTRE
NIILEVFKKDDGEWISLENFYSSVLNGVAKIRNLAAEPITLGYRIQDRWENYSQMLEKESTPLYEEELSKSLFKEVNPLP
GDCEAMSGLPIRNIWQGDYNMECFHNITNTTNPAIGRTITFDMGQVAKVSRFKMYQRRGNDPVNVWAYDHNNLKKYVIYG
CEALTDNMYLGGEVKEDGIKYPTFEGWTKIMEVECYKPSGSDNPTKTNEDLEYIENGDEHEIPLDAPNFRYIRIYMLENW
SGGTYAQIGEMTFWGQPIGK
>Mature_420_residues
MKKINYILKLTKYMSATLIGILCLTGCGQDDRIGLDATDNIAPGLPSNIKVENINGGAIISYTPPKDDDLLCVVASYMIN
GKERTTKASPYVNKLTVEGFGKVGDYQVTLKSIDKSRNESEPLSVTISPLTPPVEFIYNSLKVENSFGGVSLTWENPTRE
NIILEVFKKDDGEWISLENFYSSVLNGVAKIRNLAAEPITLGYRIQDRWENYSQMLEKESTPLYEEELSKSLFKEVNPLP
GDCEAMSGLPIRNIWQGDYNMECFHNITNTTNPAIGRTITFDMGQVAKVSRFKMYQRRGNDPVNVWAYDHNNLKKYVIYG
CEALTDNMYLGGEVKEDGIKYPTFEGWTKIMEVECYKPSGSDNPTKTNEDLEYIENGDEHEIPLDAPNFRYIRIYMLENW
SGGTYAQIGEMTFWGQPIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47476; Mature: 47476

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKINYILKLTKYMSATLIGILCLTGCGQDDRIGLDATDNIAPGLPSNIKVENINGGAII
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE
SYTPPKDDDLLCVVASYMINGKERTTKASPYVNKLTVEGFGKVGDYQVTLKSIDKSRNES
EECCCCCCCCEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHCCCCCC
EPLSVTISPLTPPVEFIYNSLKVENSFGGVSLTWENPTRENIILEVFKKDDGEWISLENF
CCEEEEECCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEEECCCCCEEEHHHH
YSSVLNGVAKIRNLAAEPITLGYRIQDRWENYSQMLEKESTPLYEEELSKSLFKEVNPLP
HHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GDCEAMSGLPIRNIWQGDYNMECFHNITNTTNPAIGRTITFDMGQVAKVSRFKMYQRRGN
CCHHHHCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCC
DPVNVWAYDHNNLKKYVIYGCEALTDNMYLGGEVKEDGIKYPTFEGWTKIMEVECYKPSG
CCEEEEEEECCCCEEEEEEEEEHHCCCEEECCEECCCCCCCCCHHCCCEEEEEEEECCCC
SDNPTKTNEDLEYIENGDEHEIPLDAPNFRYIRIYMLENWSGGTYAQIGEMTFWGQPIGK
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCEEECCCCCCC
>Mature Secondary Structure
MKKINYILKLTKYMSATLIGILCLTGCGQDDRIGLDATDNIAPGLPSNIKVENINGGAII
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE
SYTPPKDDDLLCVVASYMINGKERTTKASPYVNKLTVEGFGKVGDYQVTLKSIDKSRNES
EECCCCCCCCEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHCCCCCC
EPLSVTISPLTPPVEFIYNSLKVENSFGGVSLTWENPTRENIILEVFKKDDGEWISLENF
CCEEEEECCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEEECCCCCEEEHHHH
YSSVLNGVAKIRNLAAEPITLGYRIQDRWENYSQMLEKESTPLYEEELSKSLFKEVNPLP
HHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GDCEAMSGLPIRNIWQGDYNMECFHNITNTTNPAIGRTITFDMGQVAKVSRFKMYQRRGN
CCHHHHCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCC
DPVNVWAYDHNNLKKYVIYGCEALTDNMYLGGEVKEDGIKYPTFEGWTKIMEVECYKPSG
CCEEEEEEECCCCEEEEEEEEEHHCCCEEECCEECCCCCCCCCHHCCCEEEEEEEECCCC
SDNPTKTNEDLEYIENGDEHEIPLDAPNFRYIRIYMLENWSGGTYAQIGEMTFWGQPIGK
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA