| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349540
Identifier: 29349540
GI number: 29349540
Start: 5419109
End: 5420287
Strand: Reverse
Name: 29349540
Synonym: BT_4132
Alternate gene names: NA
Gene position: 5420287-5419109 (Counterclockwise)
Preceding gene: 29349541
Following gene: 29349539
Centisome position: 86.58
GC content: 37.4
Gene sequence:
>1179_bases ATGAAAAATATTATAAACTATATAGTTTGCAGCATGCTAATTCTCGGAATAGCTGCTTGCGGAGATATGTATGATGTACA CGAAAAGTATCTTAAAATGGGTGAAGAGACCTATCTCGGAATCGCCAGTGATTTGGAAGCGAACAGCGGTTTCAACCGTA TTGAATTGAAATGGAAACTAAATGCTGATCCTCGAATCAATGCCAGTATCATTTCTTGGGAAGGATGCGAAACTCCAATT GAGGTACCCATCTCTGCAGATCGTGATATCAATGATTATATCTCAAAGATAATTGATCTTCCAGAAGGGAAATATATCTT TTCGATAATAAATAAGAGTGAAACGGGAAAAGAATCTCTGATACAAACCATTTCCGGTGAAGTATATGGGTCTTCCTATC AAGCTGGGTTATCCGCACAAGGAATCAACTCTATGGAAGCGACACTGTCGAAAGGAGTTACCATTAAATGGGCTCCTATG GAAGGATGTACAAAAACGATGTTTACTTATACCAACAACGAAGGCAGCGAAAAAACAATCACTTTGATGGAAGGAGCAAC AACTTCTATCATACCAGATGCCGTACTTGATACAGAGTTTAAAGTAACTTCTTATTTTAAACCTTCAGAGGAGGCTATTG ACGAAATTCCATCATTAGAAAAAGTTGTGAGTTTTCCAACCTATTATACTGTATCAAAAGAAGAGTGGGACGAGATTCAT AACCAATATATCGATGTGGACAGGACAGGATGGGGAGTTGAGGCTAACACAGAAGAATTGACCGGTGAAGGAGCCGTAAA CGGGCATAAAGAAGCATTAATTGATGGTAATTTAAATACTTTCTGGCATTCACAATGGGATGGTGAAGGGAAGAATCCAC CATTGCCACATATAATCATATTTGATATGCAACAAACACAAAACATTCTATCAATAGAATTGGCTAGGCGCCAAAATAAC CTTGATTTAAAAGCAGTCATGTTCAGCATCAGTGATGACAAAGAAAACTGGACAGAATTAGGAAAATTAGATTTTCCTAA TGATAAGGTTCCTAATGCACAAATTATCTTATTACCAAAGGCTATAAGTGGAAGATATTTCCGTACTACAGTGACCGACA GCAACAATGGCGTAAATGCAAGTATTGCAGAGATTATGTTTACAATGGGAAAAAAATAA
Upstream 100 bases:
>100_bases AATTTACATGCTTGAGAATTGGAGTGGAGGTACTTATGCACAGATCGGTGAAATGACCTTTTGGGGGCAACCTATCGGGA AATAACTTAATAATTAGATT
Downstream 100 bases:
>100_bases TAGCAGTCGGTGATTAAATCAAGTGGGAAGAAAAAGTATTTTCTTCCCACTTCTATTTTCAGACAAGAAAAGATACATAT ACCATACAGTTTTATACAGA
Product: putative chitobiase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKNIINYIVCSMLILGIAACGDMYDVHEKYLKMGEETYLGIASDLEANSGFNRIELKWKLNADPRINASIISWEGCETPI EVPISADRDINDYISKIIDLPEGKYIFSIINKSETGKESLIQTISGEVYGSSYQAGLSAQGINSMEATLSKGVTIKWAPM EGCTKTMFTYTNNEGSEKTITLMEGATTSIIPDAVLDTEFKVTSYFKPSEEAIDEIPSLEKVVSFPTYYTVSKEEWDEIH NQYIDVDRTGWGVEANTEELTGEGAVNGHKEALIDGNLNTFWHSQWDGEGKNPPLPHIIIFDMQQTQNILSIELARRQNN LDLKAVMFSISDDKENWTELGKLDFPNDKVPNAQIILLPKAISGRYFRTTVTDSNNGVNASIAEIMFTMGKK
Sequences:
>Translated_392_residues MKNIINYIVCSMLILGIAACGDMYDVHEKYLKMGEETYLGIASDLEANSGFNRIELKWKLNADPRINASIISWEGCETPI EVPISADRDINDYISKIIDLPEGKYIFSIINKSETGKESLIQTISGEVYGSSYQAGLSAQGINSMEATLSKGVTIKWAPM EGCTKTMFTYTNNEGSEKTITLMEGATTSIIPDAVLDTEFKVTSYFKPSEEAIDEIPSLEKVVSFPTYYTVSKEEWDEIH NQYIDVDRTGWGVEANTEELTGEGAVNGHKEALIDGNLNTFWHSQWDGEGKNPPLPHIIIFDMQQTQNILSIELARRQNN LDLKAVMFSISDDKENWTELGKLDFPNDKVPNAQIILLPKAISGRYFRTTVTDSNNGVNASIAEIMFTMGKK >Mature_392_residues MKNIINYIVCSMLILGIAACGDMYDVHEKYLKMGEETYLGIASDLEANSGFNRIELKWKLNADPRINASIISWEGCETPI EVPISADRDINDYISKIIDLPEGKYIFSIINKSETGKESLIQTISGEVYGSSYQAGLSAQGINSMEATLSKGVTIKWAPM EGCTKTMFTYTNNEGSEKTITLMEGATTSIIPDAVLDTEFKVTSYFKPSEEAIDEIPSLEKVVSFPTYYTVSKEEWDEIH NQYIDVDRTGWGVEANTEELTGEGAVNGHKEALIDGNLNTFWHSQWDGEGKNPPLPHIIIFDMQQTQNILSIELARRQNN LDLKAVMFSISDDKENWTELGKLDFPNDKVPNAQIILLPKAISGRYFRTTVTDSNNGVNASIAEIMFTMGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43740; Mature: 43740
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50022 FA58C_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIINYIVCSMLILGIAACGDMYDVHEKYLKMGEETYLGIASDLEANSGFNRIELKWKL CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEE NADPRINASIISWEGCETPIEVPISADRDINDYISKIIDLPEGKYIFSIINKSETGKESL CCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH IQTISGEVYGSSYQAGLSAQGINSMEATLSKGVTIKWAPMEGCTKTMFTYTNNEGSEKTI HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCEEE TLMEGATTSIIPDAVLDTEFKVTSYFKPSEEAIDEIPSLEKVVSFPTYYTVSKEEWDEIH EEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHCCCCEEEECHHHHHHHH NQYIDVDRTGWGVEANTEELTGEGAVNGHKEALIDGNLNTFWHSQWDGEGKNPPLPHIII HHEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEE FDMQQTQNILSIELARRQNNLDLKAVMFSISDDKENWTELGKLDFPNDKVPNAQIILLPK EECHHCCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCEEEEEEC AISGRYFRTTVTDSNNGVNASIAEIMFTMGKK CCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKNIINYIVCSMLILGIAACGDMYDVHEKYLKMGEETYLGIASDLEANSGFNRIELKWKL CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEE NADPRINASIISWEGCETPIEVPISADRDINDYISKIIDLPEGKYIFSIINKSETGKESL CCCCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHH IQTISGEVYGSSYQAGLSAQGINSMEATLSKGVTIKWAPMEGCTKTMFTYTNNEGSEKTI HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCEEE TLMEGATTSIIPDAVLDTEFKVTSYFKPSEEAIDEIPSLEKVVSFPTYYTVSKEEWDEIH EEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHCCCCEEEECHHHHHHHH NQYIDVDRTGWGVEANTEELTGEGAVNGHKEALIDGNLNTFWHSQWDGEGKNPPLPHIII HHEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEE FDMQQTQNILSIELARRQNNLDLKAVMFSISDDKENWTELGKLDFPNDKVPNAQIILLPK EECHHCCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCEEEEEEC AISGRYFRTTVTDSNNGVNASIAEIMFTMGKK CCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA