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The map label for this gene is sgcC [H]

Identifier: 29349515

GI number: 29349515

Start: 5370014

End: 5371411

Strand: Reverse

Name: sgcC [H]

Synonym: BT_4107

Alternate gene names: 29349515

Gene position: 5371411-5370014 (Counterclockwise)

Preceding gene: 29349520

Following gene: 29349514

Centisome position: 85.8

GC content: 46.92

Gene sequence:

>1398_bases
ATGGAAGAAGTATTCAAGTACATTATCGGTCTGGGAGCGGCAGTAATGATGCCGATCATTTTCACAATTTTAGGAGTATG
TATCGGTATTAAACTCCCCAAAGCGCTCAAAAGCGGTTTGTTGGTGGGAGTCGGTTTCGTCGGCTTATCTGTAGTCACAG
CCTTGTTGACCAGTAGTCTTGGTCCGGCATTAAGTAAAATGGTAGAAATCTACGGATTGGAACTCGGTATTTTCGACATG
GGATGGCCTTCGGCAGCAGCAGTTGCCTATAATACCTCGGTCGGCGCTTTCATTATCCCTGTTTGTCTGGGAGTAAACCT
GTTAATGCTACTGACCAAAACAACCCGTACTGTTAATATTGACCTTTGGAACTACTGGCACTTCGCATTTATCGGGGCTA
TCGTATACTTCGCCTCCGATAGTATTTTCTGGGGATTTTTCGCCGCTATCATTTGCTACATTATAACATTGGTAATGGCA
GACATGACTGCTCCTGCTTTTCAGAAGTTCTATGATAAGATGGACGGTATCTCTATCCCGCAGCCTTTCTGCCAGAGCTT
CGTTCCGTTCGCGATTGTAATCAACAAGCTTTTAGATAAAATTCCGGGATTCGACAAACTGAATATCGACTCTGAAGGAA
TGAAGAAGAAATTCGGTCTGATGGGTGAACCGTTATTCCTGGGTATCGTGATTGGTTGCGGTATCGGAGCTTTGGGCTGT
GCCAGCTGGAAAGAAGTACTGGACGGCATTCCGGGTATCCTTGGATTGGGTATCAAAATGGGAGCGGTTATGGAGTTGAT
TCCACGTATCACCAGCCTTTTCATTGAAGGTTTGAAACCTATCTCTGATGCAACCCGCGAATTGATCGCTAAAAAATATA
AGAGTAATACAGGCCTGAGCATCGGTATGAGCCCTGCACTTGTCATCGGCCACCCGACAACGCTGGTTGTATCCCTGCTT
TTGATCCCGGTTACTATCTTCCTTGCAGTGATCCTTCCGGGTAACCGTTTCTTACCGCTGGCTTCTCTGGCTGGTATGTT
CTACCTATTCCCGATGATTCTGCCTATCACCAAAGGTAATGTGGTGAAATCATTCATCATCGGACTGGTAGCATTGATCG
TAGGTCTGTACTTCGTAACAGAACTGGCAGGATTCTTCACGATGGCTGCCAAAGACGTATATGCCGCTACGGGTGACCCG
ACAGTAAATATCCCCGCCGGCTTCGAAGGCGGAGCGCTCGACTTTGCATCCAGCCTCTTCTGCTGGGGTATCTTCCACCT
GACTTACAGTCTGAAGATTATCGGTCCTGCCATCCTCGTAGCCCTTGCACTGGGAATGGCAGTCTACAACCGTATCCGCA
TGAAAAGAAATGATGCGAAAAACGCAGCTAACGATTAA

Upstream 100 bases:

>100_bases
TAAAGCGGAAAAGGTCGTACTTTTGGCACGGTTTACAACTAATACCCTCTGGGGAAACACAGTAATTTATCATTAAAAAC
AGAGAAAAAAATAGAACAGA

Downstream 100 bases:

>100_bases
ATATAAGTATAATCCAAATAAAGATTCGAAAGATGAAAAAATTAGCAATTGCAATGATGATGGGTATCGCAGCTATGTCT
GCTTCTGCCCAGGTAAATTA

Product: putative phosphotransferase enzyme II, C component

Products: NA

Alternate protein names: Putative PTS system EIIC component [H]

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MEEVFKYIIGLGAAVMMPIIFTILGVCIGIKLPKALKSGLLVGVGFVGLSVVTALLTSSLGPALSKMVEIYGLELGIFDM
GWPSAAAVAYNTSVGAFIIPVCLGVNLLMLLTKTTRTVNIDLWNYWHFAFIGAIVYFASDSIFWGFFAAIICYIITLVMA
DMTAPAFQKFYDKMDGISIPQPFCQSFVPFAIVINKLLDKIPGFDKLNIDSEGMKKKFGLMGEPLFLGIVIGCGIGALGC
ASWKEVLDGIPGILGLGIKMGAVMELIPRITSLFIEGLKPISDATRELIAKKYKSNTGLSIGMSPALVIGHPTTLVVSLL
LIPVTIFLAVILPGNRFLPLASLAGMFYLFPMILPITKGNVVKSFIIGLVALIVGLYFVTELAGFFTMAAKDVYAATGDP
TVNIPAGFEGGALDFASSLFCWGIFHLTYSLKIIGPAILVALALGMAVYNRIRMKRNDAKNAAND

Sequences:

>Translated_465_residues
MEEVFKYIIGLGAAVMMPIIFTILGVCIGIKLPKALKSGLLVGVGFVGLSVVTALLTSSLGPALSKMVEIYGLELGIFDM
GWPSAAAVAYNTSVGAFIIPVCLGVNLLMLLTKTTRTVNIDLWNYWHFAFIGAIVYFASDSIFWGFFAAIICYIITLVMA
DMTAPAFQKFYDKMDGISIPQPFCQSFVPFAIVINKLLDKIPGFDKLNIDSEGMKKKFGLMGEPLFLGIVIGCGIGALGC
ASWKEVLDGIPGILGLGIKMGAVMELIPRITSLFIEGLKPISDATRELIAKKYKSNTGLSIGMSPALVIGHPTTLVVSLL
LIPVTIFLAVILPGNRFLPLASLAGMFYLFPMILPITKGNVVKSFIIGLVALIVGLYFVTELAGFFTMAAKDVYAATGDP
TVNIPAGFEGGALDFASSLFCWGIFHLTYSLKIIGPAILVALALGMAVYNRIRMKRNDAKNAAND
>Mature_465_residues
MEEVFKYIIGLGAAVMMPIIFTILGVCIGIKLPKALKSGLLVGVGFVGLSVVTALLTSSLGPALSKMVEIYGLELGIFDM
GWPSAAAVAYNTSVGAFIIPVCLGVNLLMLLTKTTRTVNIDLWNYWHFAFIGAIVYFASDSIFWGFFAAIICYIITLVMA
DMTAPAFQKFYDKMDGISIPQPFCQSFVPFAIVINKLLDKIPGFDKLNIDSEGMKKKFGLMGEPLFLGIVIGCGIGALGC
ASWKEVLDGIPGILGLGIKMGAVMELIPRITSLFIEGLKPISDATRELIAKKYKSNTGLSIGMSPALVIGHPTTLVVSLL
LIPVTIFLAVILPGNRFLPLASLAGMFYLFPMILPITKGNVVKSFIIGLVALIVGLYFVTELAGFFTMAAKDVYAATGDP
TVNIPAGFEGGALDFASSLFCWGIFHLTYSLKIIGPAILVALALGMAVYNRIRMKRNDAKNAAND

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]

COG id: COG3775

COG function: function code G; Phosphotransferase system, galactitol-specific IIC component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1790758, Length=403, Percent_Identity=38.7096774193548, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1788408, Length=394, Percent_Identity=34.2639593908629, Blast_Score=256, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013853
- InterPro:   IPR013014
- InterPro:   IPR004703 [H]

Pfam domain/function: PF03611 EIIC-GAT [H]

EC number: NA

Molecular weight: Translated: 49820; Mature: 49820

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51104 PTS_EIIC_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]