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The map label for this gene is 29349423

Identifier: 29349423

GI number: 29349423

Start: 5233402

End: 5234610

Strand: Reverse

Name: 29349423

Synonym: BT_4015

Alternate gene names: NA

Gene position: 5234610-5233402 (Counterclockwise)

Preceding gene: 29349424

Following gene: 29349422

Centisome position: 83.62

GC content: 44.25

Gene sequence:

>1209_bases
ATGGCATCGATAAAGGTCAAGTTTCGCCCATCCACCGTAAACGGCAGGGAGGGTACACTCTACTATCAGGTCATCCACAA
CCGTGTGGTCAGACAGATAAACACAGAGTATAAACTTTTCGTTTCGGAATGGGACTGCCATTCTGAAACGGTTGTCTTAC
ATCATATATCGACAGGACAAGAGAGGAACAATTATCTGCTTTCAATCGGTTCACGTATCAAGTGGGACAAGGAGAGATTG
AACAAAATCATACACACGTTATCCCAGTCCGGCACATTTGTAACGGACGATATAATCATGCGCTTTCATGACAACAGGCA
AGAACTGTCGTTTAACGCTTACATCAGCCAGCAGATAGCGAGACTGAAACGCTTGGGGAAGATACGCACTTCTGAAACTT
ATACAGCTGCACTCAGAAGTTTTAGCGGTTTTATGAATGACCCAGAGGCCTTGTTTGACCAATTTAATGCGGATTTGTTG
GCAGAGTACGAGGCTTATTTGAAAGGCAGGGGAAATACGCTCAACACCATATCCTTCTATATGCGTATTCTGAAAGCGGT
CTATAACCGTGCGGTGGAAGATGGATTGACCGAACAACGACATCCGTTCAAGTCCGTCTATACGGGAGTGGAGAAAACCA
TAAAGCGAGCCTTGTCACTCAATGATATTAGACGCATCAAAGGGCTTGACTTGTCATTGATGCCCAATCTTGACTATACC
CGTGACATGTTCCTGTTCAGTTTCTATACAAGAGGAATGTCGTTTATCGACATGGCTTATCTGAGAAAGAAGGACTTGCA
GAATGGCACTCTTTCCTATCGCAGACGGAAGACGGGACAACGGTTGTTCATCAAATGGGAAAGGTGTATGCAAGAGATTC
TTGACAAATATTTGGTAAACGAAACGGAATACCTCTTGCCCATCATTACAAAACGGGACGATGATTATCGGAAGCAATAC
GCCAACGAACTTCACCGAGTAAACCATCTGTTGAAGAAAATCGGAAAGCAACTGGATTTGCCAATACCCTTAACGATGTA
TGTTGGTCGGCATTCGTGGGCAAGTATCGCCAAGAGCCGTAATGTGCCTATCTCTGTCATTAGTGAGGGCATGGGGCATG
ATTCAGAGAACACTACGCAGATTTATCTTGCATCGCTGGATACTACTGTGGTGGATAAAGCCAATAAGAAAATACTGGAT
TTACTGTGA

Upstream 100 bases:

>100_bases
AAGTTGGAAAGTTGTACCATTGAACTTGTGAAGTTGAGCCGGGAGATTGTGGAGCTTTCAAGGGAGATGGAGAAGTGTTA
TCAATCCAAATCCGACTGAT

Downstream 100 bases:

>100_bases
AGCCGTGGATGTTTTGCGAATCTGTCCAACGCTTGCCAAGAGACGGATATTATAATGCAAAGTTACGCAAAATAATGATT
TTTAGGTCATAAAACGCTGA

Product: transposase

Products: NA

Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Integrase Family Protein; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Site-Specific Recombinase IntIA; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Bacteriophage Integrase; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MASIKVKFRPSTVNGREGTLYYQVIHNRVVRQINTEYKLFVSEWDCHSETVVLHHISTGQERNNYLLSIGSRIKWDKERL
NKIIHTLSQSGTFVTDDIIMRFHDNRQELSFNAYISQQIARLKRLGKIRTSETYTAALRSFSGFMNDPEALFDQFNADLL
AEYEAYLKGRGNTLNTISFYMRILKAVYNRAVEDGLTEQRHPFKSVYTGVEKTIKRALSLNDIRRIKGLDLSLMPNLDYT
RDMFLFSFYTRGMSFIDMAYLRKKDLQNGTLSYRRRKTGQRLFIKWERCMQEILDKYLVNETEYLLPIITKRDDDYRKQY
ANELHRVNHLLKKIGKQLDLPIPLTMYVGRHSWASIAKSRNVPISVISEGMGHDSENTTQIYLASLDTTVVDKANKKILD
LL

Sequences:

>Translated_402_residues
MASIKVKFRPSTVNGREGTLYYQVIHNRVVRQINTEYKLFVSEWDCHSETVVLHHISTGQERNNYLLSIGSRIKWDKERL
NKIIHTLSQSGTFVTDDIIMRFHDNRQELSFNAYISQQIARLKRLGKIRTSETYTAALRSFSGFMNDPEALFDQFNADLL
AEYEAYLKGRGNTLNTISFYMRILKAVYNRAVEDGLTEQRHPFKSVYTGVEKTIKRALSLNDIRRIKGLDLSLMPNLDYT
RDMFLFSFYTRGMSFIDMAYLRKKDLQNGTLSYRRRKTGQRLFIKWERCMQEILDKYLVNETEYLLPIITKRDDDYRKQY
ANELHRVNHLLKKIGKQLDLPIPLTMYVGRHSWASIAKSRNVPISVISEGMGHDSENTTQIYLASLDTTVVDKANKKILD
LL
>Mature_401_residues
ASIKVKFRPSTVNGREGTLYYQVIHNRVVRQINTEYKLFVSEWDCHSETVVLHHISTGQERNNYLLSIGSRIKWDKERLN
KIIHTLSQSGTFVTDDIIMRFHDNRQELSFNAYISQQIARLKRLGKIRTSETYTAALRSFSGFMNDPEALFDQFNADLLA
EYEAYLKGRGNTLNTISFYMRILKAVYNRAVEDGLTEQRHPFKSVYTGVEKTIKRALSLNDIRRIKGLDLSLMPNLDYTR
DMFLFSFYTRGMSFIDMAYLRKKDLQNGTLSYRRRKTGQRLFIKWERCMQEILDKYLVNETEYLLPIITKRDDDYRKQYA
NELHRVNHLLKKIGKQLDLPIPLTMYVGRHSWASIAKSRNVPISVISEGMGHDSENTTQIYLASLDTTVVDKANKKILDL
L

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47017; Mature: 46886

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIKVKFRPSTVNGREGTLYYQVIHNRVVRQINTEYKLFVSEWDCHSETVVLHHISTGQ
CCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCC
ERNNYLLSIGSRIKWDKERLNKIIHTLSQSGTFVTDDIIMRFHDNRQELSFNAYISQQIA
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHCCCHHHEEHHHHHHHHHH
RLKRLGKIRTSETYTAALRSFSGFMNDPEALFDQFNADLLAEYEAYLKGRGNTLNTISFY
HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHH
MRILKAVYNRAVEDGLTEQRHPFKSVYTGVEKTIKRALSLNDIRRIKGLDLSLMPNLDYT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH
RDMFLFSFYTRGMSFIDMAYLRKKDLQNGTLSYRRRKTGQRLFIKWERCMQEILDKYLVN
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ETEYLLPIITKRDDDYRKQYANELHRVNHLLKKIGKQLDLPIPLTMYVGRHSWASIAKSR
CCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHCCCCHHHHHHHCC
NVPISVISEGMGHDSENTTQIYLASLDTTVVDKANKKILDLL
CCCHHHHHHCCCCCCCCCEEEEEEECCHHHHHHCCHHHHHCC
>Mature Secondary Structure 
ASIKVKFRPSTVNGREGTLYYQVIHNRVVRQINTEYKLFVSEWDCHSETVVLHHISTGQ
CCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCC
ERNNYLLSIGSRIKWDKERLNKIIHTLSQSGTFVTDDIIMRFHDNRQELSFNAYISQQIA
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHCCCHHHEEHHHHHHHHHH
RLKRLGKIRTSETYTAALRSFSGFMNDPEALFDQFNADLLAEYEAYLKGRGNTLNTISFY
HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHH
MRILKAVYNRAVEDGLTEQRHPFKSVYTGVEKTIKRALSLNDIRRIKGLDLSLMPNLDYT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH
RDMFLFSFYTRGMSFIDMAYLRKKDLQNGTLSYRRRKTGQRLFIKWERCMQEILDKYLVN
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ETEYLLPIITKRDDDYRKQYANELHRVNHLLKKIGKQLDLPIPLTMYVGRHSWASIAKSR
CCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHCCCCHHHHHHHCC
NVPISVISEGMGHDSENTTQIYLASLDTTVVDKANKKILDLL
CCCHHHHHHCCCCCCCCCEEEEEEECCHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA