| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349424
Identifier: 29349424
GI number: 29349424
Start: 5234612
End: 5235034
Strand: Reverse
Name: 29349424
Synonym: BT_4016
Alternate gene names: NA
Gene position: 5235034-5234612 (Counterclockwise)
Preceding gene: 29349425
Following gene: 29349423
Centisome position: 83.62
GC content: 47.75
Gene sequence:
>423_bases ATGAAAAAGAAGAGTAAATACGGGAGAAGTCCCAAGCTGAATCCGAAGACGCACTGCGTGATGGTGCGCTTCGATGATGA GGAATGGAACAAGTTCCTCACGATGTACGAGGAATCACAGGTATATGCGAAAGCCGTCTTTCTCAAGGCGCACTTCTTCG GGCAGAAGTTCAAGGTGTTAAAGGTGGACAAGGCGATGCTGGAATACTACACCAAGTTGTCGGACTTCCACGCCCAGTTC CGTGCCATCGGCACGAACTATAATCAGGTAGTCAAAGAGCTGCGATGTCATTTTTCGGAGAAGAAGGCAATGGCTCTGCT CTACAAGTTGGAAAGTTGTACCATTGAACTTGTGAAGTTGAGCCGGGAGATTGTGGAGCTTTCAAGGGAGATGGAGAAGT GTTATCAATCCAAATCCGACTGA
Upstream 100 bases:
>100_bases CCGCCGTGGGCAGAATTATCCTCCGAAGTCGGATAATTTCAATCTTTCTTTATCAGAGATTAGACAGTGAACAAACCATA AAATTGAAAGAATAAGAAGC
Downstream 100 bases:
>100_bases TATGGCATCGATAAAGGTCAAGTTTCGCCCATCCACCGTAAACGGCAGGGAGGGTACACTCTACTATCAGGTCATCCACA ACCGTGTGGTCAGACAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKKKSKYGRSPKLNPKTHCVMVRFDDEEWNKFLTMYEESQVYAKAVFLKAHFFGQKFKVLKVDKAMLEYYTKLSDFHAQF RAIGTNYNQVVKELRCHFSEKKAMALLYKLESCTIELVKLSREIVELSREMEKCYQSKSD
Sequences:
>Translated_140_residues MKKKSKYGRSPKLNPKTHCVMVRFDDEEWNKFLTMYEESQVYAKAVFLKAHFFGQKFKVLKVDKAMLEYYTKLSDFHAQF RAIGTNYNQVVKELRCHFSEKKAMALLYKLESCTIELVKLSREIVELSREMEKCYQSKSD >Mature_140_residues MKKKSKYGRSPKLNPKTHCVMVRFDDEEWNKFLTMYEESQVYAKAVFLKAHFFGQKFKVLKVDKAMLEYYTKLSDFHAQF RAIGTNYNQVVKELRCHFSEKKAMALLYKLESCTIELVKLSREIVELSREMEKCYQSKSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16675; Mature: 16675
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSKYGRSPKLNPKTHCVMVRFDDEEWNKFLTMYEESQVYAKAVFLKAHFFGQKFKVL CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KVDKAMLEYYTKLSDFHAQFRAIGTNYNQVVKELRCHFSEKKAMALLYKLESCTIELVKL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SREIVELSREMEKCYQSKSD HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKKSKYGRSPKLNPKTHCVMVRFDDEEWNKFLTMYEESQVYAKAVFLKAHFFGQKFKVL CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KVDKAMLEYYTKLSDFHAQFRAIGTNYNQVVKELRCHFSEKKAMALLYKLESCTIELVKL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SREIVELSREMEKCYQSKSD HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA