| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349350
Identifier: 29349350
GI number: 29349350
Start: 5118058
End: 5118495
Strand: Reverse
Name: 29349350
Synonym: BT_3942
Alternate gene names: NA
Gene position: 5118495-5118058 (Counterclockwise)
Preceding gene: 29349374
Following gene: 29349347
Centisome position: 81.76
GC content: 44.52
Gene sequence:
>438_bases ATGGAAGAAATCGTATTTCATCATGCACTGCCTATCCAGTTGCGCTTCAACGACGTAGATAAATTCGGTCACGTCAACAA CACTGTCTACTTTTCTTTCTATGACTTGGGGAAGACTGAATATTTCGCCTCCGTATGTCCGGGAGTGGACTGGGAAAAGA TCGGCATAGTGGTCGTTCATATCGAAGCCAATTTTGTAAAGCAGATTTTCGCATCCGATCATATTGCCGTACAAACCGCC GTTTCTGAAATTGGAACCAAAAGCTTTCATCTCATCCAACGGGTGATCGACACGGAAACCCTAGAGGTGAAATGTATCTG CAAATCGATCATGGTAACTTTCGACCTGGAAAAACATGAGTCGATGCCGCTAACCGAAGACTGGATAGAGGCAATCTGCA AATTCGAAGGGAAGGACGTACGCAAGAAGAAAAACTGA
Upstream 100 bases:
>100_bases CTTTTTTAATATCTTCTATCATTTCTTGAACTATTTCTGTTGAGAATAACACGCAAAAGTAGTACTTTTGCGTCGAAATA AAAAAGATTAAGGGAAAACA
Downstream 100 bases:
>100_bases AAGAAATAAGCCTTCCCGGTGCCAGGACCATTCCTCATCGCTGCCTGACTTCGGAGAGCCAAAACCTGAGCGATAAGAAA AGTTTTATACTGAATCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Family Protein; 4-Hydroxybenzoyl-CoA Thioesterase
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVHIEANFVKQIFASDHIAVQTA VSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHESMPLTEDWIEAICKFEGKDVRKKKN
Sequences:
>Translated_145_residues MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVHIEANFVKQIFASDHIAVQTA VSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHESMPLTEDWIEAICKFEGKDVRKKKN >Mature_145_residues MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVHIEANFVKQIFASDHIAVQTA VSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHESMPLTEDWIEAICKFEGKDVRKKKN
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16709; Mature: 16709
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVH CCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEE IEANFVKQIFASDHIAVQTAVSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHE ECHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCC SMPLTEDWIEAICKFEGKDVRKKKN CCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVH CCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEE IEANFVKQIFASDHIAVQTAVSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHE ECHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCC SMPLTEDWIEAICKFEGKDVRKKKN CCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA