BacMap

Definition	Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession	NC_004663
Length	6,260,361

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The map label for this gene is yhcG [H]

Identifier: 29346716

GI number: 29346716

Start: 1625332

End: 1626180

Strand: Reverse

Name: yhcG [H]

Synonym: BT_1306

Alternate gene names: 29346716

Gene position: 1626180-1625332 (Counterclockwise)

Preceding gene: 29346717

Following gene: 29346715

Centisome position: 25.98

GC content: 36.04

Gene sequence:

>849_bases
ATGATTAAAGTTGAGAATTTATCTTTTACTTATCCCAAATCAAAGCACATGGTATTACACGACTTTTCTTTTTCTTTAGA
GGCAGGTCGGGTTTATGGACTGTTGGGACGTAATGGGGCAGGGAAATCAACCCTCCTTTATTTGATAACTGGATTATTGA
CTCCGAAAAAAGGGAAAATAATGTACCATGATATAAATGTCCGTTCTCGTCTGCCAATGACATTGCAGGATATGTTCTTG
GTTCCGGAAGAATTTGAATTACCTTCTATATCGTTGAAAAAGTATATTGACTTGAATGCTCCTTTTTATCCAAACTTTAG
CAAAGAGGATATGTATAAGTATCTTCATTGTTTTGAAATGGATATGGATGTGAATTTAGGGGCACTTTCTATGGGGCAAA
AAAAGAAAGTATTTATGAGTTTTGCTTTAGCTACCAATACTTCTCTTTTATTGATGGATGAACCGACAAATGGATTGGAT
ATTCCGGGAAAGAGCCAGTTTCGCAAATTTATGGCATCGGGGATGACAGATAATAAAACAATTGTGATTTCAACTCATCA
GATACGTGATATAGACAAAATGCTGGATTCTGTTATGATCATGGATGAAAGCCGGGTATTATTGAATGAATCGACAGTGC
ATATATGCGAGAAATTGTGCTTTAAGGAAAGTGATGACCGTAGTCTGATTGATAAAGCGCTTTTTGCCGTTCCTTCTTTG
CATGGGAATAGTTTGCTTTTACTGAATGAACACAACGAAGATTCAGATATCAACATAGAACTGCTATTTAATGCAATACT
GGCACAACCACAAAAGATTGCTAATTTGTTTCACGCTCAAGAAGAATAG

Upstream 100 bases:

>100_bases
TTCTTTTGTTTTTTCAGAACAAATGTATACTTTTGTAGTGTACTATTAAACTAACACACTTAGCACCATATATTAGCTCT
AACAACTAAAAAATAATATT

Downstream 100 bases:

>100_bases
ATTATGATAAAGGATACATTTTTTAGTTTTTCTCGCTTTGGAAAATTATGCCATAAAGAGATTTTAGAGAATTGGAAGTT
GTACACTCTTCGCACATTGA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIKVENLSFTYPKSKHMVLHDFSFSLEAGRVYGLLGRNGAGKSTLLYLITGLLTPKKGKIMYHDINVRSRLPMTLQDMFL
VPEEFELPSISLKKYIDLNAPFYPNFSKEDMYKYLHCFEMDMDVNLGALSMGQKKKVFMSFALATNTSLLLMDEPTNGLD
IPGKSQFRKFMASGMTDNKTIVISTHQIRDIDKMLDSVMIMDESRVLLNESTVHICEKLCFKESDDRSLIDKALFAVPSL
HGNSLLLLNEHNEDSDINIELLFNAILAQPQKIANLFHAQEE

Sequences:

>Translated_282_residues
MIKVENLSFTYPKSKHMVLHDFSFSLEAGRVYGLLGRNGAGKSTLLYLITGLLTPKKGKIMYHDINVRSRLPMTLQDMFL
VPEEFELPSISLKKYIDLNAPFYPNFSKEDMYKYLHCFEMDMDVNLGALSMGQKKKVFMSFALATNTSLLLMDEPTNGLD
IPGKSQFRKFMASGMTDNKTIVISTHQIRDIDKMLDSVMIMDESRVLLNESTVHICEKLCFKESDDRSLIDKALFAVPSL
HGNSLLLLNEHNEDSDINIELLFNAILAQPQKIANLFHAQEE
>Mature_282_residues
MIKVENLSFTYPKSKHMVLHDFSFSLEAGRVYGLLGRNGAGKSTLLYLITGLLTPKKGKIMYHDINVRSRLPMTLQDMFL
VPEEFELPSISLKKYIDLNAPFYPNFSKEDMYKYLHCFEMDMDVNLGALSMGQKKKVFMSFALATNTSLLLMDEPTNGLD
IPGKSQFRKFMASGMTDNKTIVISTHQIRDIDKMLDSVMIMDESRVLLNESTVHICEKLCFKESDDRSLIDKALFAVPSL
HGNSLLLLNEHNEDSDINIELLFNAILAQPQKIANLFHAQEE

Specific function: Somehow Involved In The Cytochrome D Branch Of Aerobic Respiration. Seems To Be A Component Of A Transport System. [C]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27436953, Length=215, Percent_Identity=25.5813953488372, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI153792144, Length=199, Percent_Identity=26.6331658291457, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI31657092, Length=221, Percent_Identity=23.9819004524887, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI27477115, Length=214, Percent_Identity=25.2336448598131, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI116734710, Length=231, Percent_Identity=25.1082251082251, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI171184400, Length=220, Percent_Identity=26.3636363636364, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=22.3255813953488, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI21536376, Length=230, Percent_Identity=21.7391304347826, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI45446740, Length=216, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27262624, Length=216, Percent_Identity=24.0740740740741, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27262626, Length=216, Percent_Identity=24.0740740740741, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI30795238, Length=215, Percent_Identity=23.2558139534884, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI27881501, Length=211, Percent_Identity=24.6445497630332, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI9955970, Length=229, Percent_Identity=26.6375545851528, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI9955968, Length=218, Percent_Identity=27.5229357798165, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI9955966, Length=218, Percent_Identity=27.5229357798165, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI45243524, Length=218, Percent_Identity=27.5229357798165, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787112, Length=215, Percent_Identity=27.906976744186, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1790739, Length=223, Percent_Identity=31.8385650224215, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786319, Length=224, Percent_Identity=27.2321428571429, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788165, Length=225, Percent_Identity=28, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789991, Length=229, Percent_Identity=24.0174672489083, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789891, Length=248, Percent_Identity=27.0161290322581, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786253, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788210, Length=217, Percent_Identity=25.3456221198157, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787792, Length=205, Percent_Identity=28.2926829268293, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786653, Length=198, Percent_Identity=26.7676767676768, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI48994943, Length=231, Percent_Identity=24.2424242424242, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1790190, Length=246, Percent_Identity=23.5772357723577, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=26.7857142857143, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87081791, Length=217, Percent_Identity=27.1889400921659, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87081834, Length=176, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787143, Length=215, Percent_Identity=24.1860465116279, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787113, Length=220, Percent_Identity=26.8181818181818, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=197, Percent_Identity=24.3654822335025, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=27.8538812785388, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789593, Length=228, Percent_Identity=24.1228070175439, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787182, Length=202, Percent_Identity=28.2178217821782, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788472, Length=230, Percent_Identity=23.0434782608696, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=223, Percent_Identity=28.6995515695067, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71983523, Length=225, Percent_Identity=28, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=225, Percent_Identity=28, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71983510, Length=225, Percent_Identity=28, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=214, Percent_Identity=24.7663551401869, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17567265, Length=245, Percent_Identity=28.1632653061224, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=221, Percent_Identity=25.3393665158371, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17533971, Length=204, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=205, Percent_Identity=26.8292682926829, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=226, Percent_Identity=25.6637168141593, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=222, Percent_Identity=24.3243243243243, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=218, Percent_Identity=26.605504587156, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17510237, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=220, Percent_Identity=26.3636363636364, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569081, Length=221, Percent_Identity=26.2443438914027, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=222, Percent_Identity=24.7747747747748, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=222, Percent_Identity=24.7747747747748, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=222, Percent_Identity=24.7747747747748, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86564969, Length=218, Percent_Identity=25.6880733944954, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992066, Length=218, Percent_Identity=25.6880733944954, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32566680, Length=224, Percent_Identity=24.5535714285714, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25146765, Length=218, Percent_Identity=25.6880733944954, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992070, Length=218, Percent_Identity=25.6880733944954, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=215, Percent_Identity=26.9767441860465, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17511077, Length=218, Percent_Identity=23.394495412844, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=219, Percent_Identity=24.2009132420091, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=207, Percent_Identity=28.0193236714976, Blast_Score=75, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321121, Length=236, Percent_Identity=23.728813559322, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641565, Length=222, Percent_Identity=26.5765765765766, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI116007184, Length=212, Percent_Identity=25.4716981132075, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221512771, Length=221, Percent_Identity=24.8868778280543, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221500365, Length=212, Percent_Identity=25.4716981132075, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24666092, Length=211, Percent_Identity=24.6445497630332, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=191, Percent_Identity=25.130890052356, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24659289, Length=209, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28573573, Length=214, Percent_Identity=24.7663551401869, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28573571, Length=214, Percent_Identity=24.7663551401869, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24648314, Length=219, Percent_Identity=21.0045662100457, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19920532, Length=192, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580930, Length=192, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45552345, Length=222, Percent_Identity=24.7747747747748, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI45552335, Length=222, Percent_Identity=24.7747747747748, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI45552343, Length=222, Percent_Identity=24.7747747747748, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI45552337, Length=222, Percent_Identity=24.7747747747748, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32085; Mature: 32085

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVENLSFTYPKSKHMVLHDFSFSLEAGRVYGLLGRNGAGKSTLLYLITGLLTPKKGKI
CEEECCEEEECCCCCCEEEEECCCEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEE
MYHDINVRSRLPMTLQDMFLVPEEFELPSISLKKYIDLNAPFYPNFSKEDMYKYLHCFEM
EEEECCCCCCCCCCHHHHEECCCCCCCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCC
DMDVNLGALSMGQKKKVFMSFALATNTSLLLMDEPTNGLDIPGKSQFRKFMASGMTDNKT
CCCCCCCEECCCCCHHEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCE
IVISTHQIRDIDKMLDSVMIMDESRVLLNESTVHICEKLCFKESDDRSLIDKALFAVPSL
EEEECHHHHHHHHHHHHEEEECCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
HGNSLLLLNEHNEDSDINIELLFNAILAQPQKIANLFHAQEE
CCCEEEEEECCCCCCCEEHHHHHHHHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MIKVENLSFTYPKSKHMVLHDFSFSLEAGRVYGLLGRNGAGKSTLLYLITGLLTPKKGKI
CEEECCEEEECCCCCCEEEEECCCEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEE
MYHDINVRSRLPMTLQDMFLVPEEFELPSISLKKYIDLNAPFYPNFSKEDMYKYLHCFEM
EEEECCCCCCCCCCHHHHEECCCCCCCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCC
DMDVNLGALSMGQKKKVFMSFALATNTSLLLMDEPTNGLDIPGKSQFRKFMASGMTDNKT
CCCCCCCEECCCCCHHEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCE
IVISTHQIRDIDKMLDSVMIMDESRVLLNESTVHICEKLCFKESDDRSLIDKALFAVPSL
EEEECHHHHHHHHHHHHEEEECCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
HGNSLLLLNEHNEDSDINIELLFNAILAQPQKIANLFHAQEE
CCCEEEEEECCCCCCCEEHHHHHHHHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]