Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346715
Identifier: 29346715
GI number: 29346715
Start: 1624513
End: 1625328
Strand: Reverse
Name: 29346715
Synonym: BT_1305
Alternate gene names: NA
Gene position: 1625328-1624513 (Counterclockwise)
Preceding gene: 29346716
Following gene: 29346714
Centisome position: 25.96
GC content: 34.07
Gene sequence:
>816_bases ATGATAAAGGATACATTTTTTAGTTTTTCTCGCTTTGGAAAATTATGCCATAAAGAGATTTTAGAGAATTGGAAGTTGTA CACTCTTCGCACATTGATGATGTATGGAGTTTTGGCAATTGCATTGATATGGGTAGGCTGTTCTGAATATAAAAGCTATA ATCCTCTCTATTCGTTTGATGAATTGAATGTGCATGTAACTACTCTGGTCATTTGGATGTGGGCTTGGTGGGGATTTGTG TGCCTTGGTACTTCGTTGGCATTCGAATCAATGAAGTCTAAACCAAGGCGTATTACAAATTTGATGTTACCTGCTAGTAC GTTTGAGAAGTTTTTTCTTCACTGGCTGATCTATGTACTTATTCTTCCGTTACTTATCTACTTTTTTATGATATTGGCAG ATTATACCCGCGTTTTGATTTGCTCAATGGTATATTCGGAAATACCTTCTATAGAACCGACACAATTTAAGTATTTTGTT GACCAGGGAGATGGTGGGTATTCATTATGTCATAATTGGTCTCAAGGAATTTTATTGATTTCACTTAATCTATATGTTCA ATCTTTATTTTTGCTAGGGAGCATTTTCTGGTCTAAGAATACTTTTCTTAAAACGCTTATAAGTTTGGTTGTAATAGGCT TTGTCTATTATTGGAGCGGAGTAGTTGCTATTCATGTGTTTGCAGATAATGATATTGTAAATTTGAATTCATTTATCTTT AAATGGGGACACATCTTATTCCCAATATTGACTATTATAAATTGGACATTGACTTATTTCCGCTTGAAAGAGTCGGAAGT AATCCATCGAATATAG
Upstream 100 bases:
>100_bases CAACGAAGATTCAGATATCAACATAGAACTGCTATTTAATGCAATACTGGCACAACCACAAAAGATTGCTAATTTGTTTC ACGCTCAAGAAGAATAGATT
Downstream 100 bases:
>100_bases AAAAGGAGGGTATGTATGAATTTTAAAGAAAGCAGAGCAATATATTTACAGATAGCCGACCGTATTTGTGATGACATCTT GTTGGGACAATACGAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MIKDTFFSFSRFGKLCHKEILENWKLYTLRTLMMYGVLAIALIWVGCSEYKSYNPLYSFDELNVHVTTLVIWMWAWWGFV CLGTSLAFESMKSKPRRITNLMLPASTFEKFFLHWLIYVLILPLLIYFFMILADYTRVLICSMVYSEIPSIEPTQFKYFV DQGDGGYSLCHNWSQGILLISLNLYVQSLFLLGSIFWSKNTFLKTLISLVVIGFVYYWSGVVAIHVFADNDIVNLNSFIF KWGHILFPILTIINWTLTYFRLKESEVIHRI
Sequences:
>Translated_271_residues MIKDTFFSFSRFGKLCHKEILENWKLYTLRTLMMYGVLAIALIWVGCSEYKSYNPLYSFDELNVHVTTLVIWMWAWWGFV CLGTSLAFESMKSKPRRITNLMLPASTFEKFFLHWLIYVLILPLLIYFFMILADYTRVLICSMVYSEIPSIEPTQFKYFV DQGDGGYSLCHNWSQGILLISLNLYVQSLFLLGSIFWSKNTFLKTLISLVVIGFVYYWSGVVAIHVFADNDIVNLNSFIF KWGHILFPILTIINWTLTYFRLKESEVIHRI >Mature_271_residues MIKDTFFSFSRFGKLCHKEILENWKLYTLRTLMMYGVLAIALIWVGCSEYKSYNPLYSFDELNVHVTTLVIWMWAWWGFV CLGTSLAFESMKSKPRRITNLMLPASTFEKFFLHWLIYVLILPLLIYFFMILADYTRVLICSMVYSEIPSIEPTQFKYFV DQGDGGYSLCHNWSQGILLISLNLYVQSLFLLGSIFWSKNTFLKTLISLVVIGFVYYWSGVVAIHVFADNDIVNLNSFIF KWGHILFPILTIINWTLTYFRLKESEVIHRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31896; Mature: 31896
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKDTFFSFSRFGKLCHKEILENWKLYTLRTLMMYGVLAIALIWVGCSEYKSYNPLYSFD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ELNVHVTTLVIWMWAWWGFVCLGTSLAFESMKSKPRRITNLMLPASTFEKFFLHWLIYVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH ILPLLIYFFMILADYTRVLICSMVYSEIPSIEPTQFKYFVDQGDGGYSLCHNWSQGILLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEE SLNLYVQSLFLLGSIFWSKNTFLKTLISLVVIGFVYYWSGVVAIHVFADNDIVNLNSFIF EHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEHHHHHHH KWGHILFPILTIINWTLTYFRLKESEVIHRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKDTFFSFSRFGKLCHKEILENWKLYTLRTLMMYGVLAIALIWVGCSEYKSYNPLYSFD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ELNVHVTTLVIWMWAWWGFVCLGTSLAFESMKSKPRRITNLMLPASTFEKFFLHWLIYVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH ILPLLIYFFMILADYTRVLICSMVYSEIPSIEPTQFKYFVDQGDGGYSLCHNWSQGILLI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEE SLNLYVQSLFLLGSIFWSKNTFLKTLISLVVIGFVYYWSGVVAIHVFADNDIVNLNSFIF EHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEHHHHHHH KWGHILFPILTIINWTLTYFRLKESEVIHRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA