Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346713
Identifier: 29346713
GI number: 29346713
Start: 1623311
End: 1624111
Strand: Reverse
Name: 29346713
Synonym: BT_1303
Alternate gene names: NA
Gene position: 1624111-1623311 (Counterclockwise)
Preceding gene: 29346714
Following gene: 29346712
Centisome position: 25.94
GC content: 37.58
Gene sequence:
>801_bases ATGAAACGCACAACATATATAATAATAGGACTTTTTGTATTGGGCTTATTCTTTATACCTATCCTTCTGCATACACCTGG CGGTGAGAAAACCGATAATCGTTTATCAATGGAAGGTGAGCGGACTGAAATAGAAATGACGGGAATCCGTCATGTGAAGG TTGTTGAAAAGCTAGGGAAGATAGATAAAGATCATATAGGCGTGTTAGGTCAGTTGGATGTGGAGGCTTCTCACTCTTCA GGTAAGAGTATATTTGTGTATCCGAAAAGTCAATATTTGCATGTGACACAAGAAGGGGATTGCTTATTGATTGAAATTAA TCTGGATAATGAAGATATCTATCAGGTAATTAGACAGGTAGAAAATGGATGCAGATTGGTTTTAGATGGTTTGAATCTGG AATTGAAAACGGATTCAACATTGTTATCTATTGAGAATCGTGCGGCTAGGCTGGATATTAATGTAAGGAAATTGTGTTTG GACTCTTTATATCTCTTTAATGACGAATGGCAGAATATCTCATTGACTTCTTGTCGCTTTCGTTCGTTGGATATAAAAGG AGAGAAGTTGCAATTGAAAGCTGAGTGGGTAGAGGCTACAAACTATTATGAAGAGTTAGGGACTTTTAGAAGTCGTGAGA CTACTCAGTTTATGGTTGAGAATCTGTATTTATCAGGAAAAGATTCGCATAAGTATCGGCCAGGTATAAATTGTAATCGT ATCTTCTGGAGTCCTCAGGTCAGAGATGCAGAACTTGAGCTGACCTTGAATCAGAAGAGTGAGATTATATTGAATCGTTG A
Upstream 100 bases:
>100_bases TTTTCAGGCAACTTTATACACTTGGTATTTCTATCAAAGAAATAGAGAAGATGTATTATGAGTTTATACAAAGACAAAAT CAATAATAAACAGATAAGAT
Downstream 100 bases:
>100_bases ACATAAATGAAAAGGAAATGAAAGTCATAAAGTCTATTGCAGTTTTAAGTCTGTCAGCTTGTTTGTTTGCTTGTACTTCC AAACCTGATTTAGACGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGKIDKDHIGVLGQLDVEASHSS GKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQVENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCL DSLYLFNDEWQNISLTSCRFRSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR IFWSPQVRDAELELTLNQKSEIILNR
Sequences:
>Translated_266_residues MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGKIDKDHIGVLGQLDVEASHSS GKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQVENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCL DSLYLFNDEWQNISLTSCRFRSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR IFWSPQVRDAELELTLNQKSEIILNR >Mature_266_residues MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGKIDKDHIGVLGQLDVEASHSS GKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQVENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCL DSLYLFNDEWQNISLTSCRFRSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR IFWSPQVRDAELELTLNQKSEIILNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30687; Mature: 30687
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGK CCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCC IDKDHIGVLGQLDVEASHSSGKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQV CCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCHHHHHHHHHH ENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCLDSLYLFNDEWQNISLTSCRF CCCCEEEEECCEEEEECCCEEEEECCCEEEEECHHHHHHHHHHEEECCCCCCEEEEEEEE RSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR EEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCE IFWSPQVRDAELELTLNQKSEIILNR EEECCCCCCEEEEEEECCCCEEEECC >Mature Secondary Structure MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGK CCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCC IDKDHIGVLGQLDVEASHSSGKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQV CCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCHHHHHHHHHH ENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCLDSLYLFNDEWQNISLTSCRF CCCCEEEEECCEEEEECCCEEEEECCCEEEEECHHHHHHHHHHEEECCCCCCEEEEEEEE RSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR EEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCE IFWSPQVRDAELELTLNQKSEIILNR EEECCCCCCEEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA