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The map label for this gene is yhiU [C]

Identifier: 29346679

GI number: 29346679

Start: 1578365

End: 1579435

Strand: Reverse

Name: yhiU [C]

Synonym: BT_1269

Alternate gene names: 29346679

Gene position: 1579435-1578365 (Counterclockwise)

Preceding gene: 29346698

Following gene: 29346678

Centisome position: 25.23

GC content: 43.23

Gene sequence:

>1071_bases
ATGACAACGACTAATTTTTCATTGTGTATTTTTTGTCTTTGCCTACTCACATCGTGTGGTAAGGGTGAGAAGAAAACAAA
CGAGCCTGTACGGGTAAAAGTGGCGGAAGCGGAAATGCTGGTTCCTTCTGCCGAGCGTGAATTTTCGTTTATTGCCAAAC
CATTCAAGGAGACCGAACTCTCTTTTCGGGTGGGCGGACCGATTGACCATTTCGAAGTGTATGCGGGGAATTACTATCAT
CGGGGAGATATCATAGCTGAAATTGATTCCCGTGATTTTCGTATTCGTAAGGAACGGGCGGAAGCTATTTATCATCAGGC
AAAAGCTGAGTTTGAGCGAATCAAAGTGTTGTATGAGAAAAACAACCTGTCTGCCAGTGCCTATGAAAAAGCACGTGCAG
ACTATACTTCTGCCAAAACTGCTTATGAAACAGCCGTAAATGAACTTGAAGATACGAAACTTATTGCTCCTTTTGACGGA
TATATAGGGGAAGTCTACATTGAAAAATATCAGGATGTGAAAGCGACTCAGTCTGTCGTTTCTTTTATCGATATCACTCA
GTTGAAGATAGAAGCGTATGTTACTCAGGAGATCGCATTTCAAGCGAAGGAAATCAAGGAAGTGGGGATTCGTTTTGATG
TTCGTCCCGAAGCAGTATATCCGGCTAAAGTGGTAGAGGTTTCAAAGAGTACGACGCGCAATAATCTTTCTTTCCTGATG
ACGGCATTGCTGCCCAATAAACAAGGAGAATGGCCGGCCGGTATCTCAGGAAAAATGTTGTTGGACCTTCCTGCTACATC
ATCTGTTCCTATGGTGACCGTTCCGCAAACGGCTCTTAATCATCGTCCCACTGAAGGAGACTATGTATGGATGGTGGATC
AAACGACAGGACAAGTCGTAAAGAGAAAAGTCATTTTAGGCGAATTGCTTCCCAATGGAAAAGTAGAAGTGAAAGACGGA
TTGCAGGCAGGAGATAAAGTAGCGGTGAGTAAATTACGTTTTCTTTCGGACGGAATGCCTGTAGATATTATTTCTCAGAA
AGAAAAAAGGGCGGTTACCGCTCAAAAGTAA

Upstream 100 bases:

>100_bases
TTTAGCTCTTTCTTTTTCCGCTTCGGAAATTAAATTCCGGTTCTTTTTTCTTCTTTCCGTTACTTTCGTGCCGTTGACAA
CGTAACTAATGTAGAATAGA

Downstream 100 bases:

>100_bases
GTAGAAGAATATGAAGTTGGTAAAATATTTCTTGCAGAAGAAGTCGGTGACTATTCTGCTGTTGATATTAGTGCTGGGAG
GAGGATTGTTTTCTTATATC

Product: component of multidrug efflux system

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Membrane-Fusion Protein; Multidrug Resistance Protein; Secretion Protein HlyD; Auxiliary Transport Protein MFP Family; HlyD Family Secretion Protein; RND Efflux Membrane Fusion Protein; Periplasmic Linker Protein; Acriflavin Resistance Periplasmic Protein; Lipoprotein; RND Efflux System Membrane Fusion Protein; Periplasmic Component Of Efflux System; Acriflavin Resistance Protein E; Efflux Protein; Transport/Efflux Transmembrane Protein; Efflux Transporter; Secretion Protein HlyD Family; Multidrug Efflux Transporter Protein; Component Of Multidrug Efflux System; Membrane Fusion Protein; Periplasmic Linker Protein Multidrug Resistance Protein; HlyD-Like Secretion Protein; AcrA/E Family Efflux Transporter MFP Subunit; Membrane-Fusion Protein AcrA; RND-Type Efflux Transporter Membrane-Fusion Protein; Efflux Transporter Component; Linker Protein; RND Membrane Fusion Protein; Protein Secretion Protein; Multidrug Transporter HlyD Family; HlyD Family Protein Secretion Protein; Cation/Multidrug Efflux System Mebrane-Fusion Component; Efflux System Protein; Multidrug ABC Transporter; RND Superfamily Transport Protein Membrane-Fusion Protein; RND Family Resistance-Nodulation- Efflux Pump; Organic Solvent Efflux Pump; Cation Efflux System Protein; Efflux Transporter Rnd Family Mfp Subunit; Multidrug Efflux Protein; RND Efflux System Membrane-Fusion Protein; Co/Zn/Cd Efflux System Membrane Fusion Protein

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTTTNFSLCIFCLCLLTSCGKGEKKTNEPVRVKVAEAEMLVPSAEREFSFIAKPFKETELSFRVGGPIDHFEVYAGNYYH
RGDIIAEIDSRDFRIRKERAEAIYHQAKAEFERIKVLYEKNNLSASAYEKARADYTSAKTAYETAVNELEDTKLIAPFDG
YIGEVYIEKYQDVKATQSVVSFIDITQLKIEAYVTQEIAFQAKEIKEVGIRFDVRPEAVYPAKVVEVSKSTTRNNLSFLM
TALLPNKQGEWPAGISGKMLLDLPATSSVPMVTVPQTALNHRPTEGDYVWMVDQTTGQVVKRKVILGELLPNGKVEVKDG
LQAGDKVAVSKLRFLSDGMPVDIISQKEKRAVTAQK

Sequences:

>Translated_356_residues
MTTTNFSLCIFCLCLLTSCGKGEKKTNEPVRVKVAEAEMLVPSAEREFSFIAKPFKETELSFRVGGPIDHFEVYAGNYYH
RGDIIAEIDSRDFRIRKERAEAIYHQAKAEFERIKVLYEKNNLSASAYEKARADYTSAKTAYETAVNELEDTKLIAPFDG
YIGEVYIEKYQDVKATQSVVSFIDITQLKIEAYVTQEIAFQAKEIKEVGIRFDVRPEAVYPAKVVEVSKSTTRNNLSFLM
TALLPNKQGEWPAGISGKMLLDLPATSSVPMVTVPQTALNHRPTEGDYVWMVDQTTGQVVKRKVILGELLPNGKVEVKDG
LQAGDKVAVSKLRFLSDGMPVDIISQKEKRAVTAQK
>Mature_355_residues
TTTNFSLCIFCLCLLTSCGKGEKKTNEPVRVKVAEAEMLVPSAEREFSFIAKPFKETELSFRVGGPIDHFEVYAGNYYHR
GDIIAEIDSRDFRIRKERAEAIYHQAKAEFERIKVLYEKNNLSASAYEKARADYTSAKTAYETAVNELEDTKLIAPFDGY
IGEVYIEKYQDVKATQSVVSFIDITQLKIEAYVTQEIAFQAKEIKEVGIRFDVRPEAVYPAKVVEVSKSTTRNNLSFLMT
ALLPNKQGEWPAGISGKMLLDLPATSSVPMVTVPQTALNHRPTEGDYVWMVDQTTGQVVKRKVILGELLPNGKVEVKDGL
QAGDKVAVSKLRFLSDGMPVDIISQKEKRAVTAQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39872; Mature: 39741

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTNFSLCIFCLCLLTSCGKGEKKTNEPVRVKVAEAEMLVPSAEREFSFIAKPFKETEL
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHHCCHHHCCE
SFRVGGPIDHFEVYAGNYYHRGDIIAEIDSRDFRIRKERAEAIYHQAKAEFERIKVLYEK
EEEECCCCCCEEEEECCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEC
NNLSASAYEKARADYTSAKTAYETAVNELEDTKLIAPFDGYIGEVYIEKYQDVKATQSVV
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
SFIDITQLKIEAYVTQEIAFQAKEIKEVGIRFDVRPEAVYPAKVVEVSKSTTRNNLSFLM
HHHHHHHEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHEEECCCCCCCHHHHHH
TALLPNKQGEWPAGISGKMLLDLPATSSVPMVTVPQTALNHRPTEGDYVWMVDQTTGQVV
HHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECHHHHCCCCCCCCEEEEEECCHHHHH
KRKVILGELLPNGKVEVKDGLQAGDKVAVSKLRFLSDGMPVDIISQKEKRAVTAQK
HHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHCCCCCCC
>Mature Secondary Structure 
TTTNFSLCIFCLCLLTSCGKGEKKTNEPVRVKVAEAEMLVPSAEREFSFIAKPFKETEL
CCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHHCCHHHCCE
SFRVGGPIDHFEVYAGNYYHRGDIIAEIDSRDFRIRKERAEAIYHQAKAEFERIKVLYEK
EEEECCCCCCEEEEECCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEC
NNLSASAYEKARADYTSAKTAYETAVNELEDTKLIAPFDGYIGEVYIEKYQDVKATQSVV
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
SFIDITQLKIEAYVTQEIAFQAKEIKEVGIRFDVRPEAVYPAKVVEVSKSTTRNNLSFLM
HHHHHHHEEEHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHEEECCCCCCCHHHHHH
TALLPNKQGEWPAGISGKMLLDLPATSSVPMVTVPQTALNHRPTEGDYVWMVDQTTGQVV
HHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECHHHHCCCCCCCCEEEEEECCHHHHH
KRKVILGELLPNGKVEVKDGLQAGDKVAVSKLRFLSDGMPVDIISQKEKRAVTAQK
HHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA